Sesión Practica 3- Micología :ESTUDIO MACROSCÓPICO Y MICROSCÓPICO DE HONGOS AMBIENTALES Y LEVADURAS — Transcript
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- 0:00You can see it, everyone.
- 0:06Yes,
- 0:08yes, yes. Ready? Okay. So, look, today
- 0:12we are going to perform the macroscopic
- 0:14and microscopic identification of
- 0:16environmental fungi and yeasts, right?
- 0:19If last week we saw how we can perform
- 0:21isolation, which can be done on
- 0:23different media, right? since they were
- 0:27placed in incubation at room
- 0:29temperature for 3 to 5 days, or
- 0:31depending, since these are
- 0:32environmental fungi, for 3 to 5 days,
- 0:35we are also going to see in this case
- 0:37that we will observe fungi and yeasts
- 0:39on these plates, right? We already said
- 0:43that fungi have a different appearance
- 0:45than yeasts; yeasts look a lot like
- 0:47bacteria in this case, right? So, the
- 0:51objective of this lab is to perform a
- 0:53macroscopic and microscopic study of
- 0:55molds and yeasts for their
- 0:57identification. As a specific objective
- 1:03, we are going to see that you will
- 1:05apply inoculation techniques on culture
- 1:07media for the growth of these fungi,
- 1:09right? How do we...let's see, back
- 1:15again. So, apply inoculation techniques
- 1:18on culture media for the growth of the
- 1:20fungi, right? And therefore, we are
- 1:22going to describe the macroscopic and
- 1:24microscopic characteristics of
- 1:26filamentous fungi and yeasts. Why?
- 1:28Because in this case, they have certain
- 1:30characteristics, right? Just as we saw
- 1:34with bacteria, they were round, lobate,
- 1:36rhizoid; we also have to describe both
- 1:39the molds and yeasts, right? So, we
- 1:42must also differentiate the macroscopic
- 1:45and microscopic characteristics of
- 1:47filamentous fungi and yeasts, right?
- 1:49Because while it is true that we can
- 1:51differentiate them macroscopically, we
- 1:53can also make the distinction
- 1:55microscopically in this case, right?
- 1:59And apply study techniques for the
- 2:01microscopic examination of fungi,
- 2:02because there are different types of
- 2:04ways or techniques we can use to
- 2:06identify them, right? And among these
- 2:10techniques, the microculture technique
- 2:12is used for the microscopic study of
- 2:14fungi. Therefore, the competency to
- 2:16develop is to identify fungi according
- 2:18to the macroscopic and microscopic
- 2:20characteristics of the fungi, following
- 2:23established procedures, right? So,
- 2:27regarding the identification part, we
- 2:29are going to do it in the case of
- 2:31Guaroto, but Guaroto isn't here. And
- 2:35why are you joining? Wait a second. I'm
- 2:37going to stop sharing because I'm...I'm
- 2:39getting in there. Guaroto, where is
- 2:41Guaroto? Guaroto, aren't you from this
- 2:44...from this group? I mean, you are,
- 2:46let's see, Piero Alexandro Guaroto,
- 2:51please, leave the leave the room, leave
- 2:58the room, Piero. Okay,
- 3:00professor, excuse me, my classmate
- 3:02Aparc, Aparcana just entered. Yes, okay
- 3:05. Now yes, Aparcana. Yes, it's just
- 3:07that I thought, uh, he is working and
- 3:09Guaroto entered, and I accepted him and
- 3:11I didn't see the other one. Yes. Okay,
- 3:13now he is in. But you are arriving late
- 3:16, Marañón. Ah,
- 3:18professor, excuse me, I am trying to
- 3:20enter, but my internet is a bit poor. I
- 3:23don't know if you can count me in the
- 3:24attendance. It is the first time that I
- 3:26am going to miss
- 3:26attendance. I will let you in, but you
- 3:28will be marked late. That that always
- 3:31goes to your to your to your to your
- 3:32grade that
- 3:35yes.
- 3:36Yes, yes,
- 3:37yes. I am marking you as present. I am
- 3:39marking you as present, but I am
- 3:41telling you that those are tardies. The
- 3:43tardies.
- 3:43No, you are not marking me as absent.
- 3:45No, I am not marking you as absent.
- 3:48Okay, okay. Okay. So, we are going to
- 3:54look at the identification in this case
- 3:56of fungi, which is studied through
- 3:58macroscopic study, right? When I am
- 4:01talking about fungal identification, in
- 4:03this case I am I am uh referring to
- 4:05molds, to those that are filamentous,
- 4:07right? So, what is it that has to be
- 4:10studied here? The shape and size of the
- 4:14mold, color of the surface and the
- 4:16reverse as well, because, I mean, we
- 4:18are not just going to study the
- 4:20characteristics I am seeing, I have to
- 4:22turn the plate and then I have to study
- 4:24the reverse. Why? Because it happens
- 4:29sometimes that on the obverse, as we
- 4:31call it, when I am looking at it, I can
- 4:33see a uh a granular surface of black
- 4:35color, but I turn the plate over and I
- 4:37will see in this case a white or yellow
- 4:40color, right? Another color, it could
- 4:43be red too, right? Or different types
- 4:45of colors. So, those characteristics
- 4:48that we have to put down, we have to
- 4:50note them because according to the
- 4:52taxonomic keys that is what is being
- 4:54asked of us, right? We can also see if
- 4:58the fungus has the capacity to diffuse
- 5:00the pigment, right? Which means that
- 5:02the fungus has this characteristic of
- 5:04presenting these secondary metabolites
- 5:06that I told you about yesterday, but by
- 5:08by producing these secondary
- 5:10metabolites it will produce a pigment
- 5:12that will diffuse into the medium.
- 5:13Therefore, sometimes we can see in this
- 5:16case that the medium turns somewhat
- 5:18brownish, yellowish, or reddish. So,
- 5:20this means it has the ability to
- 5:22produce, in this case, pigments, right?
- 5:26Regarding the texture, in this case,
- 5:28you have to observe if it is chalky,
- 5:30looking like plaster, like soil, right?
- 5:33Like a little bit of soil, like some
- 5:34dust that has been added there. It
- 5:36seems like they are little granules,
- 5:38right? Sometimes they look like, uh,
- 5:40little granules like pepper, right?
- 5:42Sometimes we can see that they present
- 5:44fine hairs or otherwise it looks like
- 5:46wool, usually coiled, right? Sometimes
- 5:48they can also be creamy or velvety. In
- 5:51this case, we also have to see, in this
- 5:53case, if we observe the plate, right?
- 5:57And we look at it with the naked eye,
- 5:59we can see if that colony is raised or
- 6:02if the colony is completely flat, or
- 6:04perhaps it only has a central elevation
- 6:06. Do you remember that we, uh, also
- 6:10worked on that part with bacteria,
- 6:12right? So, here it is very similar, it
- 6:15is studied, except that in this case we
- 6:17have to, uh, see the type of fungus,
- 6:19right? And also, in this case, apart
- 6:22from the texture we can see, the fungus
- 6:25has aspects it can present. If you
- 6:27observe and if you have seen this type
- 6:29of fungus, sometimes you can say, you
- 6:31can see the colony is somewhat rounded,
- 6:33which will form some small folds, right
- 6:36? Or otherwise they will form, in this
- 6:39case, like circumferences, right? Or it
- 6:42could be that in this case there are
- 6:44elevations and depressions, which looks
- 6:46cerebriform like a brain, or it could
- 6:48be crateriform when there is an
- 6:50elevation in the center, right? As for
- 6:55the consistency, we cannot determine
- 6:57that just by observation. In this case,
- 7:01we have to use a mycological loop to
- 7:03touch the colony to see if it is hard,
- 7:05soft, if it is firm, or if it comes off
- 7:08like a thin membrane, right? Why?
- 7:10Because we do have to check the type of
- 7:12consistency, right? Sometimes there are
- 7:17even fungi that are so hard that, for
- 7:19us to observe them, we have to make a
- 7:21small cut and place it on the slides
- 7:22for us to see, because it is very stuck
- 7:25to the culture medium in this case.
- 7:29Apart from that, it is also important
- 7:31in the macroscopic study that during
- 7:33the time you carry out the incubation,
- 7:35you have to see, uh, how it has grown,
- 7:38right? Sometimes by the third day you
- 7:41will see it completely filling the
- 7:42plate, right? Sometimes Rhizopus muor
- 7:46has that property of immediately
- 7:48filling the plate, but there are others
- 7:50that you will see on the fifth day and
- 7:52you will see the colony is still very
- 7:54small, right? So, these are the
- 7:57macroscopic studies that can be
- 7:59performed, right? So, here you can see
- 8:02the surface. I was telling you that you
- 8:05have to work on the color of the
- 8:07surface and the reverse, right? Here we
- 8:09are seeing the obverse, right? It is
- 8:11the surface, as you can see, right?
- 8:13Here we are going to see it somewhat
- 8:15powdery, right? Here in this case as
- 8:18well, look, somewhat velvety, right?
- 8:21Here, somewhat creamy. You will see
- 8:23this one here, for instance, it can be
- 8:25hairy, as you see it, like a type of
- 8:28hair, right? And apart from that, you
- 8:32can also see its appearance in this
- 8:33case sometimes. Look here, a fold is
- 8:37formed here. Here there is a central
- 8:40uplift. If you observe here, look, it
- 8:43is forming circles, right? Look, this
- 8:46is like a brain type. So, first the
- 8:49color, later we will see the other, but
- 8:51I am telling you that you can also
- 8:53observe all that part there, right? So,
- 8:56this is an example of how we are going
- 8:58to see the obverse and the reverse,
- 9:00right? If you observe here on the
- 9:02obverse, you will see what color, sort
- 9:05of white, right? But if you flip it
- 9:07over, generally, what will we see?
- 9:09Actually, sort of yellowish, right? So,
- 9:13that is what you have to do to study
- 9:15first, the macroscopic characteristics
- 9:17of the colony, right? I told you that
- 9:20it has the capacity to produce pigment.
- 9:22Look at the sort of orange pigment it
- 9:24shows here. Here also somewhat red, if
- 9:26you see, look, pink that they might be
- 9:29giving, that is to say, the fungus has
- 9:31the capacity to diffuse in this case
- 9:33the type of pigment, right? And this is
- 9:37a secondary metabolite that they are
- 9:39going to diffuse. I even told you that
- 9:42this diffusion of pigment, which I
- 9:44forgot to mention yesterday in the
- 9:46metabolism part, nowadays these
- 9:48pigments are being used as dyes, right?
- 9:51At a student congress, a project we did
- 9:53with the students took second place,
- 9:55right? Right in the course, right?
- 9:58Where they isolated fungi, fungi, and
- 10:00saw fungi that had the capacity to
- 10:02produce pigment. So, these fungi that
- 10:05produced pigments, in this case, what
- 10:07they have done is extract the pigment
- 10:09from these types of fungi and they dyed
- 10:12, in this case, some cotton, right? And
- 10:15so nowadays, it is also being used in
- 10:17the industrial sector to obtain
- 10:19pigments. These would be natural
- 10:22pigments, right? What was missing in
- 10:24the work is simply, why? Because every
- 10:26time one can extract a metabolite, in
- 10:28this case a secondary one, one must
- 10:30check for toxicity, right? Because
- 10:32sometimes it can also be toxic, right?
- 10:34So we have to look at that part. But
- 10:36the importance of the pigment is also
- 10:38an important factor, right? There we
- 10:41can see the texture, which can be
- 10:43chalky, it can be earthy, it can be
- 10:45granular, right? They look like little
- 10:47granules, right? Hairy, woolly, creamy,
- 10:50velvety. meaning that we have to look
- 10:53at what texture it has in this case,
- 10:54right? And these are the aspects I was
- 10:58telling you about, that if you are
- 11:00going to see, look, they can produce a
- 11:02folded aspect. And here, highlight in
- 11:05this case that when one sees the color,
- 11:07one cannot only see a single color, but
- 11:09can see several colors. And so you also
- 11:12have to describe it, right? As an
- 11:15example of this colony, you can see
- 11:17that the color is generally orange in
- 11:19the central part, around this color, in
- 11:21this case it will be green, and it ends
- 11:23, in this case, with a cream border,
- 11:25right? So that is what you have to do
- 11:28in this case according to the color, in
- 11:30the case of the aspect you are going to
- 11:32see that they form folds, it is folded.
- 11:34Look, here yes, here also, here you are
- 11:36going to see that they have three
- 11:38colors. Look, even four, one here
- 11:40darker, one lighter, a dark green, and
- 11:43here around it also a border, right?
- 11:46And the aspect in this case is radiated
- 11:48. Look, apart from the fact that they
- 11:51can be mixtures of two, in this case it
- 11:53is radiated, but also folds, not folds
- 11:55very close together like this one here,
- 11:57but slightly open folds, but generally
- 11:59the radiated aspect. Look how it is
- 12:01forming the circumferences, right? This
- 12:04one here you can see a cerebriform
- 12:06aspect. This one is also folded, but in
- 12:09this one it is not cerebriform, but it
- 12:12is like a crater, right? Look, here you
- 12:15can also observe this one has a central
- 12:17elevation. Look, flat here around, but
- 12:19it has a central elevation. And besides
- 12:22that, it’s also important, look, this
- 12:24one is folded, right? This one is also
- 12:27folded in this case, but look here,
- 12:29there are some oily spots, right? There
- 12:32are certain types of fungi that have
- 12:34these exudates, and this must also be
- 12:36noted: they present certain types of
- 12:38exudates that can be yellow, can be
- 12:40white, can be pink, which look like
- 12:42little droplets that you have created,
- 12:44oil droplets that are dispersed, mainly
- 12:46the type of, and the surface, as you
- 12:51can see, look, is raised, this one is
- 12:53flat, this one has a central elevation,
- 12:55and this one has a generally total
- 12:57elevation, right? Everything is raised
- 12:59in this case. Now, once we perform the
- 13:03macroscopic study, we must perform the
- 13:06microscopic study, right? So, I have
- 13:09already done the study, so for the
- 13:11microscopic study, what do I have to do
- 13:13? So, I am going to take my sample and
- 13:16for the microscopic study, I have to
- 13:18make use, in this case, of the
- 13:20microscope, right? So there, in the
- 13:23microscopic study, I have to see, this
- 13:26is done with—uh, there are two
- 13:28techniques—that is, the wet mount,
- 13:30right? Or the Scotch tape technique,
- 13:33right? Or we will see the microculture
- 13:36technique. And that will allow us to
- 13:40observe, in this case, what—and
- 13:42sometimes we will have to stain with
- 13:44lactophenol blue. And so, once we make
- 13:47this preparation, which I will explain
- 13:50to you later, we will see the type of
- 13:52hyphae, and that is why we did the
- 13:53theoretical part, right? In the
- 13:56theoretical part, we said that fungi
- 13:59can be septate or coenocytic or
- 14:00aseptate, right? So you have to note,
- 14:05you have to look through the microscope
- 14:07, you have to see the type of hypha to
- 14:09see if it presents septa or does not
- 14:10present septa. What else should you
- 14:14have there? hyphal modifications and
- 14:20the hyphal modifications that we said
- 14:22we can see if, in modifications, they
- 14:25generally form chlamydospores, they
- 14:27will—they will form a rhizomorph,
- 14:29right? This is what we are going to
- 14:32have to see, if it will form a rhizoid,
- 14:34right? So we have to see if the fungus
- 14:37presents hyphal modifications or not,
- 14:39or nodular forms as I told you there,
- 14:41right? Now, apart from that, one can
- 14:44observe the type of mycelium. The type
- 14:46of mycelium, you see if it is
- 14:48transparent or if it is dematiaceous,
- 14:50right? We have already said that there
- 14:53are fungi that won't have the capacity
- 14:55to produce or display these dark
- 14:56pigments, and therefore the mycelium
- 14:58will be transparent. That is why
- 15:02lactophenol blue is used to be able to
- 15:04observe this much better, right? And
- 15:06the dematiaceous ones are generally
- 15:08dark, to the point that sometimes even
- 15:10lactophenol blue doesn't stain them,
- 15:12right? But we will see them as dark,
- 15:14right? In the case of Alternaria, for
- 15:16example, we will see that it is a dark
- 15:18mycelium. What else can we do in the
- 15:20microscopic study? Type of spores.
- 15:23Whether it presents sexual spores or
- 15:25asexual spores, right? We still need to
- 15:29look at reproduction in this case, and
- 15:31you are mainly going to learn to
- 15:33recognize if they are sexual or asexual
- 15:35spores. What else should we look at?
- 15:38And this is very important, right? Here
- 15:41regarding the aspect of the
- 15:42sporangiophore or conidiophore. Fungi,
- 15:47as I was telling you, have a vegetative
- 15:49mycelium that enters the substrate to
- 15:51feed, but there is a mycelium that
- 15:53emerges, which is the aerial one, and
- 15:55there we will have the reproductive
- 15:57structures, and therefore, in those
- 15:59reproductive structures, a sporophore
- 16:01will be produced. This sporophore can
- 16:06be a sporangiophore or it can be a
- 16:08conidiophore. When do we call it a
- 16:11sporangiophore? When this mycelium—
- 16:15and that's why there is a
- 16:17differentiation here—usually the
- 16:19hypha emerges and forms a vesicle, and
- 16:21inside that vesicle, we will have
- 16:23spores. That type of sporophore is
- 16:29called a sporangiophore. And when we
- 16:34talk about a conidiophore, this hypha
- 16:36no longer makes that differentiation,
- 16:38it doesn't form that rounded shape that
- 16:41we will observe; instead, the conidia
- 16:43will emerge not enclosed, but
- 16:44externally. And those conidiophores
- 16:48will also adopt different types of
- 16:49shapes depending on how the spores are
- 16:51generally grouped, right? And so we
- 16:53will have sporangiophores or
- 16:55conidiophores. And this is an important
- 16:57factor because in taxonomic keys, if
- 16:59you look at an Aspergillus, you see it
- 17:02looks a bit rounded, and we will see
- 17:04there are phialides with little spores
- 17:06that look like a sun, it seems. That is
- 17:09a conidiophore; the spores are external
- 17:11. But if you observe, let's say, Mucor,
- 17:14you will generally see a vesicle that
- 17:17encloses them, and inside those
- 17:19vesicles are, in this case, the spores,
- 17:21right? That is in the drawings in the
- 17:24taxonomic keys. That is why fungal
- 17:27taxonomic keys allow us to perform
- 17:29identification based on these aspects
- 17:31that fungi produce. Why? Because if you
- 17:36only look at the type of hyphae, you
- 17:37won't be able to identify the fungus
- 17:39for me. If you see hyphal modifications
- 17:43, well, possibly if you find a rhizoid,
- 17:45you can say, "Ah, it could be a
- 17:47Rhizopus or maybe a Rhizomucor, right?"
- 17:51If you only see that it is transparent
- 17:53or dematiaceous, you can't tell me what
- 17:56it is. If it is the type of sexual
- 17:59spores, many fungi will present the
- 18:01same sexual spores or the same asexual
- 18:04spores that are very similar, right?
- 18:06Although, well, with sexual spores we
- 18:09can in this case tell the difference,
- 18:11right? Because there are ascospores,
- 18:13zygospores, but it doesn't identify it
- 18:14for me. I can say it is an ascospore,
- 18:17but I cannot say which fungus it is. No
- 18:19, I can say it is a zygospore, but I
- 18:21cannot say which fungus it is. But this
- 18:24aspect of the sporangiophore can give
- 18:26me, therefore, an idea of the genus,
- 18:28right? An indication of the genus. I
- 18:30can say, this is a Mucor, or this is a
- 18:33Rhizopus, this is a Rhizomucor. I can
- 18:36suddenly say this is a Penicillium,
- 18:38right? This is a Fusarium, right? This
- 18:41is an Alternaria because of the
- 18:42characteristics of the conidiophore
- 18:44that I will see, right? But it is also
- 18:46important to look at the aspect and
- 18:47size of the conidia. The aspect and
- 18:50size will allow me, if I already see
- 18:52the sporangiophore or conidiophore, the
- 18:54aspect and size of the conidia can give
- 18:56me an index of what species it might be
- 18:59. Why? Because conidia can generally be
- 19:02different, right? One could say there
- 19:05are Aspergilli whose conidia can be
- 19:07small and round, smooth, and others
- 19:09that will be somewhat spiky. So that
- 19:11will be in the taxonomic keys as well,
- 19:13they will tell you Aspergillus
- 19:15such-and-such will present this, right?
- 19:19And we will see if they present
- 19:21specialized structures, right? If they
- 19:27are going to produce, in this case, the
- 19:29types of perithecia or apothecia, we
- 19:31will see that in the microscopic study,
- 19:33right? So, what do we have to look at?
- 19:38Type of hypha. Yes, we have already
- 19:40said, this is a septate hypha. And this
- 19:42is a coenocytic or non-septate hypha,
- 19:44right? If you look here through the
- 19:47microscope, I am only seeing hyphae,
- 19:49right? And so I am going to see the
- 19:51septa, right? So I can observe that
- 19:53this one has a septum. If I look at
- 19:55this part here, I will see that it
- 19:57doesn't have septa, right? Even though
- 19:58it appears to have septa here, right?
- 20:00Actually, a hypha has just crossed over
- 20:02here, right? But this is a coenocytic
- 20:04hypha; it does not present the septum
- 20:06that in this case generally separates,
- 20:09like, a compartment. Not here; here it
- 20:12is completely, in this case, without
- 20:14circulation. Generally, the cytoplasm
- 20:18circulates completely, right? If we
- 20:20look at the type of mycelium, we are
- 20:22going to have a hyaline type of
- 20:24mycelium. You can even see here if the
- 20:26type of mycelium is microsiphonous or
- 20:28macrosiphonous, right? The
- 20:29microsiphonous one is thin, whereas the
- 20:32macrosiphonous one is wide, right? For
- 20:34example, this is a microsiphonous
- 20:35mycelium and this is a macrosiphonous
- 20:37one, but in terms of color, this one is
- 20:39generally transparent and this one is
- 20:40dematiaceous. Look at me, you see it is
- 20:42dark; even here it is no longer
- 20:44necessary. Well, it is not stained here
- 20:46, but here you will see that none of
- 20:48these are stained; they are directly
- 20:50like this so you can differentiate that
- 20:52this is generally transparent. Look,
- 20:54even the spores themselves that you can
- 20:56see. On the other hand, you put this
- 20:58here and you can already tell mainly
- 21:00what it is; sometimes staining is not
- 21:02necessary, right? However, the
- 21:03techniques and procedures tell us that
- 21:05we have to stain with lactophenol blue,
- 21:07right? Look, and here you are going to
- 21:09observe, right? You will even see that
- 21:12the septate mycelium they form with
- 21:14this is—this is a conidiophore, but
- 21:16the conidiophore, let's see, look at
- 21:18how the spores come out in this case,
- 21:20right? That is what we have to look at.
- 21:23So, we have to look at the types of
- 21:25sexual and asexual structures. If you
- 21:27observe here, there are different types
- 21:29of structures that produce sexual
- 21:31spores. The first three that you are
- 21:34going to see here, which you see here,
- 21:36are sporangiophores, right? And the
- 21:38others, and these here, are
- 21:40conidiophores. Look at this one here,
- 21:42where is the spore? Internally. Here,
- 21:45also internally. Here, internally,
- 21:47right? But here, the spores are
- 21:49generally on the external part. And you
- 21:51will see that these sporangiophores are
- 21:53also different, they are also different
- 21:55. There are some elongated ones, some
- 21:57rounded ones, but we have to look at
- 21:58that. But here you can differentiate.
- 22:01This is a sporangiophore and this is a
- 22:03conidiophore. These are the ones that
- 22:06will produce asexual spores, right? And
- 22:08the sexual spores here are also
- 22:10unicellular, they can be multicellular
- 22:12depending on the fungus and the
- 22:14taxonomy. If we look at the bottom part
- 22:17, they are actually sexual spores,
- 22:19right? In this case, it is an oogonium,
- 22:23this is a zoospore, right? This is an
- 22:26oogonium that you will see will form
- 22:28its spore here. Here this is an
- 22:31aeciospore, this is a basidiospore.
- 22:34Look here that they are—sorry, this
- 22:36is an ascospore that is inside an ascus
- 22:38and here we will see the ascospores
- 22:40that are internal and this is a
- 22:42basidiospore that are external, right?
- 22:45This is the basidiospore, right? And
- 22:47here in this case it is born from a
- 22:49basidium, right? So there we can, in
- 22:52this case, determine. So there we have,
- 22:55look, the different types of structures
- 22:57that we can observe, right? If I ask
- 23:00you there, are these conidiophores or
- 23:02sporangiophores? Hm. What do you think
- 23:08there? Are there internal spores or are
- 23:12there external spores? And there are
- 23:17also
- 23:19I can't hear you. Sure. Let's see, a
- 23:22bit slower so I can hear you. Well, I
- 23:25observe external and internal ones. It
- 23:28is also observed.
- 23:29Let's see, which one would be internal?
- 23:31The one here, the one here, the one
- 23:33here. Let's see, 1, 2, 3. Is it in the
- 23:36first row or in the second row that is
- 23:37internal? Let's see,
- 23:38in the second row there is an internal
- 23:40one and in the middle of the first row
- 23:42is the internal one. There are also
- 23:44four internal ones.
- 23:45It is internal, this is one, two, three
- 23:48, four. No, if you observe there, they
- 23:50are all spores. They are all spores,
- 23:53look. Ah, they are spores and they are
- 23:56external spores. Let's see here. Let's
- 23:59let's change here. Look, this is a—
- 24:03here these are spores. Apparently it
- 24:06seems like there is something inside,
- 24:08right? But these are macroconidia. It
- 24:12is a macroconidium that has this
- 24:14elongated shape, but it is in clusters.
- 24:17This is also a macroconidium and this
- 24:19that you observe here is the
- 24:21conidiophore. Look, it's the
- 24:23conidiophore. From this conidiophore
- 24:26one, two, three conidia will emerge and
- 24:28these are macroconidia. This is the
- 24:31same, it's a macroconidium. That is,
- 24:34each one of these that forms a cluster
- 24:36is a macroconidium. This is from
- 24:37Fusarium, for instance, right? This is
- 24:40a macroconidium too. Look,
- 24:41macroconidium. Which one is the
- 24:43microconidium? This one here, these
- 24:45little dots. This fungus, for example,
- 24:47presents—there are fungi that present
- 24:49macroconidia and microconidia. This one
- 24:52here is also microconidia and this is
- 24:54the sporophore, the conidiophore, the
- 24:56conidiophore itself. So, this
- 24:59characteristic that you have to look
- 25:01for is important for genus
- 25:02identification. I’ve shown you this
- 25:06here so you can see that these are
- 25:07asexual spores. Asexual spores can be
- 25:11microconidia, or they can be
- 25:13macroconidia. In this case, there are
- 25:15fungi that will present both micro and
- 25:17macroconidia. There are others that
- 25:19only present macroconidia and sometimes
- 25:21don’t present microconidia, right? So
- 25:24I also have those characteristics. But
- 25:26these are asexual spores, right? And
- 25:29these are sexual spores. I was telling
- 25:32you that fungi can produce ascospores.
- 25:34So, if you look here, this is an ascus
- 25:36and inside this ascus we will have the
- 25:38ascospores, right? So these are asci.
- 25:41If you look here, look, asci. And
- 25:43inside here you will see the ascospores
- 25:45. This is sexual reproduction. The
- 25:50basidiospore also has a basidium here
- 25:52and its sterigmata, and inside these
- 25:54sterigmata you will see the
- 25:55basidiospores coming out. This is a
- 25:58sexual spore. Here I will also observe
- 26:01it. Look at the basidium here and the
- 26:03sterigmata are here, and here are the
- 26:05basidiospores. This quantity of spores,
- 26:07how the basidium type is formed, also
- 26:10helps me in species identification,
- 26:12right? For example, Agaricus bisporus,
- 26:15which is the mushroom, has the ability
- 26:17to produce this type of basidium with
- 26:20only two basidiospores; there are
- 26:22others, generally there are four
- 26:24basidiospores, but there are some that
- 26:26can present two in this case, right,
- 26:29Professor?
- 26:29And this is the zygospore. Yes, I’m
- 26:31listening.
- 26:32Is there a possibility of finding
- 26:34basidiospores and ascospores at the
- 26:36same time?
- 26:36No, no, no.
- 26:38Only
- 26:39one of
- 26:39it’s one type of sexual reproduction.
- 26:42For example, a fungus can form oospores
- 26:45, basidiospores, ascospores, or
- 26:47zygospores, but not both types. That is
- 26:50why they have been classified; that is
- 26:52why there is this classification in
- 26:53this case. So there you can observe
- 26:56this is a zygospore, for instance here
- 26:58is the zygospore, right? And this is
- 27:01the way it originates, right? In the
- 27:03reproduction class we will have next
- 27:05week, we will see it. And this is the
- 27:08appearance of the sporangiophores and
- 27:10the conidiophores. Look at the
- 27:12sporangiophores. Look, here is the
- 27:14hypha, and there is also a
- 27:15differentiation here, and here is a sac
- 27:18, and inside this sac we will have
- 27:20spores; these are called
- 27:21sporangiophores and these are
- 27:23conidiophores. Look here, right? Here
- 27:27we generally have the hypha where we
- 27:29will see phialides, and here are the
- 27:31conidia. These conidia that are in this
- 27:35case are also asexual. Yes, asexual,
- 27:38look, asexual this whole part, right?
- 27:41So, it is important that we are able to
- 27:44know this. Why? Because in taxonomic
- 27:46keys these diagrams will appear, and
- 27:48you have to look, even to say, "It's a
- 27:51Penicillium, but what type of
- 27:52Penicillium is it?" There are different
- 27:55species. So, you will have to see if
- 27:57they are monoverticillate,
- 27:58diverticillate, due to these whorls
- 28:00that they will present. No, there are
- 28:02some that are just long, others are
- 28:04more leafy. It is the same as
- 28:06Aspergillus, right? Aspergillus niger,
- 28:08for instance, is like a like a like a
- 28:11sun, right? Why? Because these
- 28:13phialides will surround the entire
- 28:14vesicle. On the other hand, Aspergillus
- 28:17fumigatus only has like a little tuft
- 28:19here, and that will allow me to
- 28:20differentiate the types of Aspergillus,
- 28:22right? That is why I told you that here
- 28:24one must have a lot of expertise
- 28:26generally to be able to identify them.
- 28:27You have to be at the microscope
- 28:29looking to be able to work, right? And
- 28:31these are the aspects of the colonies,
- 28:33right? They are oval, rounded,
- 28:35spiculate, right? They take the form
- 28:38that they are grouped in chains, others
- 28:40are all alone. So, this also has to be
- 28:43worked on. That is why in mycology one
- 28:46must use uh these these these these
- 28:48little rulers that go on the microscope
- 28:50, right? For us to be able to generally
- 28:55measure the sizes of the spores, and
- 28:57even the size in this case of the hypha
- 28:59to say if it is microsiphonous or
- 29:01macrosiphonous. I told you that those
- 29:05greater than 1 micrometer are generally
- 29:07macrosiphonous and smaller ones are
- 29:09microsiphonous, right? So, that will
- 29:12allow us to see the size that the
- 29:13conidia or in this case the hypha can
- 29:16generally have, right? Well, and these
- 29:18are aspects and sizes of ascospores,
- 29:20right? These are reproductions. Look,
- 29:22even the ascospores, the ascospores
- 29:25generally uh we will see that it is
- 29:27inside an ascus, right? Let's add more
- 29:30here. Let's No, if we are going to
- 29:34assume that we are going to have that
- 29:36this is an ascospore, right? This is an
- 29:39ascospore, and inside these ascospores
- 29:42they can generally come like this, so
- 29:44to speak, right? And these are the asci
- 29:46, this is an ascus, and inside this
- 29:48there can be different ascospores,
- 29:50right? Let's assume it's this type, LV,
- 29:53look, right? So inside this, they are
- 29:55going to come like this. The ascus has
- 29:58to break open so that they can, so that
- 30:00the fungus can reproduce in this case,
- 30:02because fungi reproduce by spores,
- 30:04right? So they can come like that, or
- 30:06they can be inside this ascus, and they
- 30:08have morphologies like Saturn-shaped,
- 30:11lemon-shaped, or urchin-shaped, but
- 30:13it's inside the ascus. These ones here
- 30:15that you are seeing in this case are
- 30:17ascospores, right? These are ascospores
- 30:20, the different forms of ascospores
- 30:22that can be determined. And this is
- 30:24when this ascus, we are generally going
- 30:26to break it, right? And these
- 30:28specialized structures I was telling
- 30:30you about can be, uh, they produce
- 30:32pseudoparenchyma, it can be a
- 30:34prosenchyma, it can present a rhizoid,
- 30:36a rhizomorph, or a haustorium, right?
- 30:39An appressorium. You have to determine
- 30:41that part, right? For example, there is
- 30:44a haustorium, right? Which is here
- 30:46inside, right? You make a cross-section
- 30:48, and these are mycelial aggregations.
- 30:51What happens is there are, uh, the
- 30:53hyphae generally, or also the
- 30:55conidiophores, right? Or the spores
- 30:59generally, uh, sometimes asexual ones
- 31:01can also, uh, aggregate, right? As a
- 31:05way for these spores to protect
- 31:07themselves, and they form sclerotia,
- 31:09right? Which is, is, is the filament,
- 31:13in this case, the union of fungi. Do
- 31:16you remember when we did, uh, uh, the
- 31:19sclerotia or sclerotium? Those are
- 31:22macroscopic, right? What it means is
- 31:24the union of hyphae, right? And it
- 31:27generally forms like small nodules, but
- 31:29something more that one can see, right?
- 31:32It is not, it is not, it is not that we
- 31:34need a microscope. This here we can
- 31:36observe, right? Uh, we can see that
- 31:39sometimes the conidiophores that we
- 31:40have seen here can join together, right
- 31:42? And form a coremia, right? So it is
- 31:46the, the coremia is the union of
- 31:48conidiophores, right? Or it could be
- 31:51that the spores, in this case asexual
- 31:53ones, can be placed inside a pycnidium,
- 31:56right? And they are generally protected
- 31:58there. Well, this is a pycnidium.
- 32:01Generally, if you see a pycnidium,
- 32:05Right? Now, in the case of yeasts, I
- 32:08was generally telling you that it is
- 32:10different in this case than for...than
- 32:12for...than for bacteria, right? Oh,
- 32:16sorry, different from molds, right?
- 32:18They are very similar to bacteria,
- 32:20right? We can determine the shape, we
- 32:23can determine the appearance, what
- 32:25elevation, what margin or what pigment,
- 32:27right? The shape is rounded, sometimes
- 32:30medium or irregular, it can be, right?
- 32:32What is the appearance? Right? They can
- 32:35be creamy in appearance, right? Uh, if
- 32:38it is flat, crateriform, or concave,
- 32:41right? Uh, the margin, right? If it has
- 32:44an entire margin, an undulate margin,
- 32:47and if it has the capacity in this case
- 32:49to produce pigments or not. So there we
- 32:52can see microscopic characteristics,
- 32:54right? As I was telling you, yeasts are
- 32:57unicellular, generally with creamy
- 32:59growth on culture media, very similar
- 33:01to bacteria. Reproduction can also be
- 33:04sexual or asexual, and asexual
- 33:06reproduction generally occurs by
- 33:08budding, right? So you will see that,
- 33:11uh, it will form a little bud. It is a,
- 33:13uh, that is a blastospore, right? In
- 33:17this case, but it can also have sexual
- 33:19reproduction which will be by
- 33:21ascospores or basidiospores, right? So
- 33:25we will also see that for, yes, yeasts
- 33:28generally, we will see here, uh, here
- 33:30that sometimes the yeasts that have
- 33:32this rounded shape, uh, when there is
- 33:34sexual reproduction, they will form
- 33:37ascospores inside. Yes, here they will
- 33:41form inside this. Why? Because this is
- 33:45the ascus, and inside this we will see
- 33:47ascospores, right? So there we will see
- 33:50if it is going to form or not form
- 33:52ascospores, right? So that is what we
- 33:55have to look at in this case, right?
- 33:57But look here, let's see for a moment,
- 34:03right? If you observe here, look here,
- 34:05these are ascospores. Here they are.
- 34:07Here, look, this one is inside. Yes, it
- 34:10is forming ascospores. Here it is also
- 34:12forming ascospores. And if you observe,
- 34:15the shapes are different, right?
- 34:16Elongated, rounded; for instance, this
- 34:19one here is forming, let's say,
- 34:21pseudomycelium, right? These are
- 34:23examples of yeasts that we might have,
- 34:25right? Look, there are the different
- 34:27elongated shapes. Look, here are
- 34:29ascospores. These are ascospores. Look
- 34:32inside here. This one is budding. Look,
- 34:34here is its little bud. It is sexual
- 34:36reproduction. Or, in a yeast, both
- 34:38sexual and asexual reproduction can
- 34:40occur. Ah, that’s right, but not an
- 34:42asexual reproduction where we will have
- 34:44a basidiospore or ascospore, right? It
- 34:46is either an ascospore or a
- 34:47basidiospore. Yes, here too, look, here
- 34:50you will see, they will even generally
- 34:52form a certain type of nodule. Look
- 34:55over here, they can be elongated here.
- 34:58Look, this is almost not—it is also
- 35:00elongated, they are yeasts, right? This
- 35:03is a pseudomycelium, for instance, look
- 35:05, a pseudomycelium, and these over here
- 35:08that you see are also chlamydospores,
- 35:10right? There are yeasts that will
- 35:12produce chlamydospores as well. So, you
- 35:16have to recognize that morphology,
- 35:18right? Now, apart from that, both molds
- 35:21and yeasts can undergo biochemical
- 35:24study, right? I told you that for the
- 35:28most part, what we generally observe is
- 35:30the microscopic and macroscopic study,
- 35:33but there are some that do require it,
- 35:35mainly yeasts, just as bacteria require
- 35:37a biochemical study in this case, but
- 35:39molds do too. So, the use of—it is a
- 35:45—it is a biochemical study that is
- 35:48used, right? Here, it is used the same
- 35:51way as it has been used for bacteria in
- 35:53Christensen’s urea agar, where we
- 35:55will see that the culture medium has
- 35:58urea and a pH indicator, right? And
- 36:02when we inoculate it, throughout the
- 36:04incubation period, if the microorganism
- 36:06is urease-positive, because there are
- 36:08fungi that will have this urease enzyme
- 36:11. Then, the final products will be
- 36:16basic, right? And since it has a color
- 36:19indicator there, we will generally see
- 36:21that it will turn—in this case, what
- 36:23color does it turn?—red, right? It is
- 36:26urease-positive. Another medium that is
- 36:30also used in this case is nitrate
- 36:32reduction. So, here you can use a
- 36:35nitrate broth or a nitrate agar, right?
- 36:38And if the microorganism has nitrate
- 36:41reductase, it will reduce nitrate to
- 36:43nitrite, and for that, reagent A and
- 36:45reagent B are used, right? Review that
- 36:48because we have already done it in
- 36:50microbiology. Eh, now there are other
- 36:53tests that in this case are used for
- 36:55molds—sorry, for yeasts, right? Which
- 36:59are the auxanogram and the zymogram.
- 37:04The auxanogram means the fungus's need
- 37:06to use carbon or nitrogen sources,
- 37:08right? So, look up what an auxanogram
- 37:14is and what a zymogram is, okay? I will
- 37:18ask you about it in the practical
- 37:19session next class. For an auxanogram,
- 37:24I will ask what carbon or nitrogen
- 37:26sources a fungus generally needs for
- 37:28its growth. On the other hand, a
- 37:34zymogram generally involves the
- 37:36utilization of carbohydrates with the
- 37:38formation of acid, so a medium is used
- 37:40where we determine if it is utilized or
- 37:43not, right? Let's use an example that
- 37:49we might have. Let's suppose, right?
- 37:56Let's assume we have a plate—well,
- 37:58not a petri dish, there has to be a
- 38:00special medium here, sometimes agar is
- 38:03used, right? And for an auxanogram,
- 38:08let's say I want to know, and here I
- 38:10will have my little disks, my
- 38:12carbohydrate disks, which could be
- 38:14glucose, lactose, sucrose, right? This
- 38:20is a medium that is free of carbon
- 38:22sources, right? And so, what you will
- 38:26do is take each little disk—it could
- 38:29be glucose, lactose, or sucrose, right?
- 38:34These disks are soaked, right? And this
- 38:38is the medium. And then, what you will
- 38:41do is inoculate the yeast you want to
- 38:43evaluate to see what it needs for its
- 38:45growth. Then, you will place the disks
- 38:49just like an antibiogram. An
- 38:53antibiogram. You place one disk here,
- 38:56one here, and one here. Right, I'm just
- 39:01giving an example; I can't draw well
- 39:03with this thing, but anyway. So, here
- 39:06we have the sugars, right? And I take
- 39:09it to incubate. If the microorganism
- 39:12needs—let's assume this one is
- 39:14lactose, this is sucrose, this is, well
- 39:17, maltose, let's put that here. If
- 39:25around these, say, you see growth
- 39:27forming—meaning you see the
- 39:29microorganism has moved here and grown
- 39:31—it means this microorganism needs
- 39:33lactose as a carbon source, right? And
- 39:39that is how it is tested, right? It
- 39:42could be that a yeast can use two
- 39:44carbon sources, right? But if it hasn't
- 39:48grown, this is called a lack of growth.
- 39:51Notice that when we talk about an
- 39:52antibiogram, we look for an inhibition
- 39:54zone where we didn't see growth, right?
- 39:58On the other hand, a growth halo forms
- 40:00here, meaning that around the disk,
- 40:02since the yeast needs that carbohydrate
- 40:04to grow, the yeast will grow around
- 40:06that little piece of filter paper
- 40:08soaked in sucrose. So, the auxanogram
- 40:12is used to demonstrate, in this case,
- 40:14the carbon and nitrogen requirements
- 40:17that the yeast needs to grow, right?
- 40:20And the zymogram is for fermentation,
- 40:22right? Here you can use a medium that
- 40:26has, let's suppose, glucose. Glucose,
- 40:31right? There are liquid media and there
- 40:33are also solid media, right? Glucose is
- 40:35used, and it also has a pH indicator
- 40:38here. If the microorganism uses the
- 40:41glucose, the final product will be
- 40:43acidic, and therefore, this medium will
- 40:46turn yellow, right? Always depending on
- 40:48which indicator is used, right? That is
- 40:50one example that can be done. And also
- 40:52the vitamin requirements. I told you
- 40:54yesterday that there are microorganisms
- 40:56that need vitamins, right, to be able
- 40:58to grow. And so, for yeasts, a series
- 41:01of vitamins is also placed to know
- 41:03which vitamins, in this case, they need
- 41:05for their growth. Well, here you are
- 41:10generally seeing examples of this is,
- 41:13uh, this is urea, this is a urea
- 41:15positive, and this is, ah no, excuse me
- 41:17, this is a urea positive and this is a
- 41:20negative one, right? Here, this currant
- 41:25red color gives me a urease positive,
- 41:27and this is a urease negative. Here is
- 41:31an auxanogram, generally where you see
- 41:33in this case, I don't know, it doesn't
- 41:35look clear that the Well, but around
- 41:37this you will see that look, the colony
- 41:39has grown, right? In these, on the
- 41:41other hand, it hasn't. These are disks
- 41:43that are soaked with sugars, right? And
- 41:45this is a nitrate broth, right? This is
- 41:48nitrate positive and this is a negative
- 41:50broth, right? They are nitrate positive
- 41:52, nitrate negative. What other studies
- 41:55can be done? I told you that
- 41:56physiological studies can be done,
- 41:58right? And to be able to observe if
- 42:01they are growing, physiological or
- 42:03chemical studies, if they can be
- 42:05growing in culture media in liquid
- 42:06media, uh, you can see at different
- 42:08temperatures and if they are resistant
- 42:11to chemical agents, right? So there,
- 42:15you can also determine if they grow in
- 42:17liquid media, and in liquid media we
- 42:19will see if the growth is superficial
- 42:21or at the bottom, right? That can also
- 42:26be observed, done at different
- 42:27temperatures to determine what
- 42:29temperature these fungi tolerate, right
- 42:31? And there is resistance to chemical
- 42:34agents, right? To be able to determine,
- 42:37uh, if it is resistant, say, even to
- 42:39antibiotics, right? If they are
- 42:42resistant to chloramphenicol, to
- 42:44cycloheximide, it is determined. Now,
- 42:48apart from these, these, uh, these
- 42:51tests that we work with, in this case,
- 42:53semi-automated methods are used, right?
- 42:57For example, in the case of yeast, uh,
- 43:00there is a semi-automated system which
- 43:02is the API system, right? Which is a
- 43:05gallery of 20 little tubes, right? Uh,
- 43:08little tubes or cups, as they are
- 43:10called, that have dehydrated substrates
- 43:13and allow for, look, 19 assimilation
- 43:15tests. Right? So, let's suppose that I
- 43:18found a type of yeast and I want to see
- 43:20what type of yeast it is. So, what I am
- 43:22going to do is dilute this colony that
- 43:24I have isolated. Previously, one must
- 43:26isolate the colony and then perform
- 43:28these biochemical tests, right? So you
- 43:31inoculate with a minimal medium that is
- 43:33a semi-solid medium and, uh, the yeasts
- 43:36will reproduce if they use these
- 43:38substrates, right? These, these
- 43:40semi-automated methods allow for
- 43:43identifying, look, 34 different species
- 43:45of yeast, right? It is much faster than
- 43:47doing the whole process we might have,
- 43:49but these methods are much more
- 43:51expensive, right? So, these readings,
- 43:54uh, these reactions are compared with a
- 43:56growth control and the identification
- 43:58is obtained through a numerical code,
- 44:00right? So, these already come with a
- 44:03type of code one-two, and so one,
- 44:05according to this reading, goes reading
- 44:07; we go to an analytical catalog and
- 44:09you can identify it. But these
- 44:12semi-automated ones also have a
- 44:14software program, right? That
- 44:16immediately as you type, it starts
- 44:18showing, uh, what identifies the type
- 44:20of yeast it is, right? And nowadays,
- 44:23chromogenic media are also being used,
- 44:25right? Mainly for types of Candida and
- 44:28there is another one for Prototheca
- 44:30that has been used, right? In this case
- 44:36, these are media that generally have
- 44:38within their components a substance
- 44:40that causes the yeast that is going to
- 44:42act to form different colors, and that
- 44:44difference in colors will allow me to
- 44:46identify what type of yeast it is,
- 44:48right? These are, uh, rapid methods,
- 44:53much more expensive, yes, but they are
- 44:55providing very good results for
- 44:57identification, right? So, we can see
- 45:00Candida albicans, which is green;
- 45:02Candida tropicalis is blue; krusei is a
- 45:05pinkish, slightly rough color; and
- 45:07parapsilosis is a medium lilac-pink,
- 45:10right? And the Prototheca species are
- 45:12generally cream-colored, right? In fact
- 45:15, there's even a new yeast being worked
- 45:17on today, which is a type of Candida.
- 45:20I’ve forgotten the species right now,
- 45:23but this company has also released it,
- 45:25mainly to be able to identify it using
- 45:27a chromogenic method. There are other
- 45:33enzymatic systems that are very similar
- 45:35to what are called cassettes, just like
- 45:37when you want to test for COVID, you
- 45:39put a sample in, and it produces a
- 45:41result, right? So there is also a VITEK
- 45:45system for Candida to determine the
- 45:47type of Candida, right? So you place
- 45:49the sample here, and here you will see
- 45:51if it is Candida or if it is not
- 45:53Candida, right? These are the methods
- 45:55being used today, and these are the
- 45:57molecular methods currently in use,
- 45:59such as PCR, right? So, you already
- 46:02know the type of PCR where you
- 46:04generally have to denature the strands,
- 46:06then anneal, and then extend, right? So
- 46:10those are the cases that can be worked
- 46:12with, and in this case, molecular tests
- 46:14. I was saying that today these
- 46:16molecular methods are being used quite
- 46:18a bit for fungi to be able to work. I
- 46:20hope we can have this type of PCR to be
- 46:22able to identify things much faster,
- 46:24right? So, those are the techniques.
- 46:28Now, if we want to do a type of
- 46:30inoculation, and we have already
- 46:31isolated it and are going to inoculate
- 46:33it, what loops are we going to use?
- 46:36Here you can use a ring or circular
- 46:38loop; a non-calibrated one can be used
- 46:40for streak plating and general
- 46:42inoculation. This is used much more in
- 46:45yeasts because it is very similar to
- 46:47bacteria, right? So these loops are
- 46:49used for yeast inoculation, for example
- 46:52, right? We can use the L-shaped thick
- 46:55wire loop. If you look, this wire is a
- 46:59little thicker than the normal
- 47:00bacteriological loop we are familiar
- 47:02with. You have seen that we have
- 47:05pointed loops and round loops, right?
- 47:07Which are very thin. For fungi, we use
- 47:09slightly thicker ones, right? And this
- 47:13must be at a 90-degree angle in an
- 47:15L-shape because this mainly allows us
- 47:17to pluck the mycelium. We can't just
- 47:20use a normal one for the mycelium, or
- 47:22it will get tangled. But not here, here
- 47:24we can take it out, right? This even
- 47:27allows us, as I was saying, when the
- 47:29fungi are hard, to make a small cut in
- 47:31the agar to place it between a slide
- 47:33and coverslip and press it down to
- 47:35observe it, right? But there is also a
- 47:39sharp-pointed inoculation loop that
- 47:41serves to purify small colonies and
- 47:43distribute fresh fungal preparations.
- 47:46This one here is a type of
- 47:47sharp-pointed needle that generally has
- 47:49some little spikes. It's not, it's not
- 47:52smooth. It is a bit rough, which also
- 47:56allows me, in this case, to be able to
- 47:58take the sample, right? You can even
- 48:01use two of these because sometimes it
- 48:03curls up, and I was saying that it
- 48:04allows us, sometimes there's one here
- 48:06that looks like a spatula, right? A
- 48:08small spatula that also allows us, in
- 48:11this case, to take the type of sample.
- 48:15So, for the microscopic study, we are
- 48:17going to look at the technique using
- 48:19transparent adhesive tape, which is
- 48:21called the tape mount, right? Why?
- 48:25Because we are going to use a type of
- 48:26uh adhesive tape. Nowadays we can do it
- 48:31with Scotch tape, but today these
- 48:33adhesive tapes are already available;
- 48:35they even come pre-cut in laboratories,
- 48:37right? You just pull one off, and it
- 48:41looks, uh, like the size of a, of a
- 48:44coverslip, right? And you place that,
- 48:47although this is an adhesive tape that
- 48:49allows, in this case, uh, generally
- 48:51adhering to the colony, right? So, it
- 48:54says here, "Press the adhesive side of
- 48:56a piece of transparent tape onto the
- 48:59surface of a colony." Place the tape
- 49:01stretched out over a drop of
- 49:02lactophenol blue or aniline blue, then
- 49:05place it on a microscope slide, right?
- 49:07So, what we are going to do is take
- 49:08this here, we are going to put it on,
- 49:10right? I will explain it to you later,
- 49:12right? So, the transparent tape
- 49:14preparation allows us to observe under
- 49:15the microscope how the microorganism
- 49:17develops in the culture. Generally, the
- 49:19spores remain intact because, uh, the
- 49:21problem with the bacteriological or
- 49:23mycological loops we have is that
- 49:25sometimes we even tear off the
- 49:27conidiophores, and they cannot be
- 49:29observed. Right? So, the spores also
- 49:32remain intact, and identification is
- 49:34carried out more easily. One of the
- 49:39disadvantages is that if we don't press
- 49:41firmly enough, the tape might not
- 49:43adhere properly, and sometimes we won't
- 49:45be able to identify it. So, there must
- 49:49also be a methodology to be able to
- 49:51work, right? So look here with the
- 49:53bacteriological loop, you can see there
- 49:55is a tape that isn't visible, and it's
- 49:57being pressed; you press it here to be
- 49:59able to observe it, right? Once it's
- 50:02taken, usually with the scotch tape,
- 50:04you place it on your glass slide, right
- 50:06? And we have the other technique,
- 50:09which is the wet mount. You already
- 50:10know that one. It uses a slide and a
- 50:13coverslip, generally with those loops I
- 50:15told you about, the fine needles, right
- 50:17? Or sometimes, if we can't do it with
- 50:20one, we use two, right? Um, what you
- 50:22should try to do is pull it from the
- 50:24base and place it carefully in the
- 50:26center of the drop of lactophenol blue,
- 50:28right? Sometimes, if it's not possible,
- 50:31you use two loops and you lower the
- 50:33mycelium so that it can fall, right?
- 50:37And in this case, the coverslip is
- 50:39placed while avoiding the formation of
- 50:41bubbles. That is indeed important,
- 50:44right? So there it is too, look at the
- 50:47bacteriological loop at a 90-degree
- 50:49angle. You pull it mainly from here,
- 50:52place, look, a portion, there it is
- 50:54with its lactophenol blue, and you are
- 50:56going to place it. Now, those are two
- 51:01methods that are generally used most
- 51:03frequently, but sometimes it happens
- 51:05that those methods can help us identify
- 51:07; but sometimes it happens that we only
- 51:09take spores or hyphae and we can't see
- 51:11them, so we can't identify the fungus,
- 51:14and for this case, the microculture
- 51:15technique or what is called slide
- 51:17culture is used, right? So, here we are
- 51:22going to need, generally, to have a—
- 51:24we are first going to prepare where we
- 51:27are going to culture. We are going to
- 51:31need a Petri dish. In the Petri dish,
- 51:35we are going to place a piece of filter
- 51:37paper or it could be a piece of cotton.
- 51:39Small glass rods are placed, cut to the
- 51:43appropriate size, and a slide and a
- 51:45coverslip are placed on top. All of
- 51:49this is taken to be sterilized because
- 51:51on that slide, I am going to place my
- 51:54culture medium, it's called
- 51:55microculture, but it must be sterilized
- 51:57beforehand. Now, apart from that, you
- 52:03can work with agar blocks, right?
- 52:06Sabouraud, or whatever I need for my
- 52:08culture medium for others, right? This
- 52:11must be poured into a plate, and when
- 52:13it has solidified in this case, it
- 52:15should be approximately 4 mm deep—
- 52:18small, not too thick. Then, with a
- 52:23scalpel loop, I will make—you can
- 52:25make them rounded or square—and with
- 52:27a sterile scalpel, what I am going to
- 52:30do is place this small piece of agar
- 52:32onto my coverslip. Right? So, I have it
- 52:37here now, in this case, uh, for me it
- 52:39is much more...uh, easier to have a
- 52:46little tube with agar, like PDA agar,
- 52:48let's say, which is in a liquid state
- 52:50and warm, and with a sterile
- 52:52micropipette, I take and place one or
- 52:54two little drops of agar on the slide
- 52:56instead of cutting. So I place one or
- 53:01two drops, and since they are tiny, it
- 53:03solidifies very quickly. So, now I have
- 53:07my culture medium on the microscope
- 53:09slide, and then from the slide, with a
- 53:11sterile needle, I generally go to the
- 53:13colony I want to identify, take the
- 53:15sample, and on that little piece of
- 53:17culture medium, you are going to place,
- 53:20in this case, uh...or you are going to
- 53:22inoculate, right? Uh, sometimes you can
- 53:26inoculate in four quadrants, in the
- 53:28corners, or just in the center, and
- 53:30then you place the coverslip on it.
- 53:31That is why the coverslip must also be
- 53:33sterile, right? So, after the
- 53:35inoculation, the coverslip is placed.
- 53:38And then, what is that paper or the
- 53:40piece of cotton that is placed for? Why
- 53:42? Because with a sterile pipette, uh,
- 53:45what you are going to do is soak it
- 53:47with water, in this case, sterile water
- 53:49, right? Which means you are going to
- 53:52moisten it to provide the necessary
- 53:54humidity for the fungus to grow. Why?
- 53:56Because if you place it as is, since
- 53:58the medium is so thin, it will dry out
- 54:00in two or three days, and then there
- 54:02will be no water activity for the
- 54:03fungus to grow. So, you generally have
- 54:05to soak it a little, usually the bottom
- 54:08part, in order to work, right? And it
- 54:10is incubated, and then you will see it,
- 54:12right? Then, the colony will grow
- 54:14underneath the surface of the coverslip
- 54:16. The assembly is examined periodically
- 54:18with the naked eye to determine if that
- 54:20little piece of agar has grown, right?
- 54:23And then, after you have waited well,
- 54:25from three to five days, you are going
- 54:27to remove the coverslip and take
- 54:29another slide; you will put lactophenol
- 54:31blue on it and place that coverslip on
- 54:33top, and on the other piece, where a
- 54:35little bit of the medium remains, you
- 54:37also add lactophenol blue and place a
- 54:39coverslip. That is to say, you can
- 54:41obtain two slides to be able to observe
- 54:44what is around it. You have to apply
- 54:47nail polish, you have to seal it, and
- 54:49those microculture slides can last
- 54:51forever if you keep them well, right?
- 54:53So, this is a way of how you can
- 54:55properly remove the little pieces. It
- 54:57can be in a round shape, right? You
- 54:58place it there. Here they are
- 55:00inoculating, right? If you see here, it
- 55:02is at the four distant points, but you
- 55:04can also put it in the center, right?
- 55:06And then you place the coverslip. And
- 55:08after the coverslip, look, you have
- 55:09already observed that it has grown. You
- 55:11remove this here, add lactophenol blue,
- 55:13and it can also be observed here. Look,
- 55:15this is a little square. Look here,
- 55:17here is the medium. Here it is, look at
- 55:20the base, which is the paper. They have
- 55:22already placed the culture medium. Here
- 55:24is the fungus they want to inoculate,
- 55:25they are going to inoculate it. Look
- 55:27that here it is with this, this is
- 55:28called, this is a mycological loop,
- 55:30right? Spatula-shaped. They place it,
- 55:32they are inoculating it, and then with
- 55:34the coverslip, they generally place the
- 55:36coverslip here. You are going to see
- 55:38that here they are already adding water
- 55:40with the wash bottle, right? The water
- 55:42to moisten it. You take it to incubate.
- 55:44Look, it has already grown here. You
- 55:46are going to remove this part here.
- 55:48Look, and here you have your slide with
- 55:50lactophenol blue and you place this
- 55:51coverslip here. But I can also use what
- 55:54remains there, I add the lactophenol
- 55:56blue in this case, and what I am going
- 55:58to do is observe, right? So that is
- 56:00what is done in this case, right? So,
- 56:03you are going to have to carry out the
- 56:05study of the following fungi. Here you
- 56:07are going to see the different fungi,
- 56:08it is an Aspergillus, which is what you
- 56:10have to study, right? That is why your
- 56:13task here is that, right? To perform
- 56:16the study macro and microscopic of the
- 56:19fungi. Look, here you have, you are
- 56:22going to see, I am already putting the
- 56:24genus and the species in this case so
- 56:26that you can see them and you can
- 56:28determine the characteristics for me,
- 56:30right? First, try to do it yourselves
- 56:33and then go to your bibliography to
- 56:35corroborate. What is it that you are
- 56:37seeing, right? What do you see? Do you
- 56:38see a conidiophore, a sporangiophore,
- 56:41do you see septate or coenocytic hyphae
- 56:43, is it macro-siphonate,
- 56:44micro-siphonate, do you see sexual or
- 56:47asexual spores? You have to look at
- 56:49that microscopically, and
- 56:50macroscopically I am only showing you
- 56:52the obverse, I am not showing you the
- 56:54reverse, only the obverse, right? Look
- 56:56here, right? So you are going to tell
- 56:58me, it is as if you were in the microsc
- 57:00—you have arrived at the laboratory
- 57:02and this fungus has grown for you. So,
- 57:04you perform the study. Later you will
- 57:06perform the study with lactophenol blue
- 57:08, which you won't actually do, but I am
- 57:10providing you with the figure of what
- 57:12possibly came out, right? Here you also
- 57:15have what came out, right? Here you
- 57:18also see this part, right? Here too,
- 57:21look. So I am placing different types
- 57:25of fungi here in this case for you to
- 57:27observe, right? What do you see, is
- 57:30there hyphal modification, is there no
- 57:32hyphal modification, right? What shape
- 57:34does it have? If it has sexual or
- 57:36asexual spores, likewise here, what
- 57:38modification does it have? And you can
- 57:40put it there. So, these fungi are the
- 57:42ones I am giving you for your
- 57:43assignment so that you can identify
- 57:45them.
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