An Interview With Professor Eric Smith#10| Life Formation, Philosophy Of Science, Language Structure — Transcript
Full transcript
- 0:00think about the expression living thing
- 0:03think about it as a linguist don't think
- 0:04about it as a scientist for now
- 0:08that sentence has a subject and a
- 0:10predicate
- 0:12the subject is the thing and the
- 0:15predicate is living
- 0:17but as a logician think about what a
- 0:19predicate is
- 0:22a construction of that form says the
- 0:24primary
- 0:25objects of our discourse are things
- 0:27anything we care about must start with
- 0:29things
- 0:31now i want to take the universe of all
- 0:33things
- 0:34and i want to group it into two sets the
- 0:36living ones and the not living ones
- 0:38and the predicate tells me which set i'm
- 0:40in
- 0:42so i will say in having chosen to frame
- 0:46the sentence that way
- 0:47people have committed what logicians
- 0:49call a category error
- 0:51because the starting point in the
- 0:54universe is not
- 0:55things and so if you start your sentence
- 0:58by committing to beginning with things
- 1:01you have already boxed yourself into a
- 1:03blind end that you can't escape from and
- 1:04there is no answer to that question
- 1:11[Music]
- 1:18erica smith received the bachelor of
- 1:21science in physics and mathematics from
- 1:23the
- 1:23california institute of technology in
- 1:271987
- 1:28and a phd in physics from the university
- 1:31of texas
- 1:33at austin in 1993 with a dissertation on
- 1:37problems in a string theory and high
- 1:39temperature superconductivity
- 1:42from 1993 to 2000
- 1:46he worked in physical non-linear and
- 1:48statistical acoustics
- 1:50at the applied research labs ut
- 1:54austin and the los alamos national
- 1:57laboratory
- 1:59from 2000 he has worked at the santa fe
- 2:02institute on problems of
- 2:04self-organization in thermal chemical
- 2:07and biological systems a focus on his
- 2:10current work
- 2:11is the statistical mechanics of the
- 2:13transition from the
- 2:15geochemistry of the early earth to the
- 2:17first levels of biological organization
- 2:20with some emphasis on the emergence of
- 2:23metabolic network
- 2:24he's also the co-author of the origin
- 2:27and nature of life on earth the
- 2:29emergence of the fourth
- 2:31geosphere so you seem to have a very
- 2:35interesting resume uh
- 2:38so how you first
- 2:41started physics then you moved into
- 2:43studying the origins of life so
- 2:46how did you decide to make that
- 2:48transition
- 2:50yeah i would not have had the sense to
- 2:52make that decision other people made it
- 2:54for me
- 2:56um so when you don't get a job you try
- 2:58to find a way to survive
- 3:01and when it was clear i was not going to
- 3:04continue
- 3:05in high energy physics i had a period of
- 3:08scrambling of just trying to find any
- 3:10kind of work i could do
- 3:12and so i started a line of research
- 3:15myself
- 3:15in the house and just started publishing
- 3:17from the house
- 3:19and tried to find it
- 3:22a profession where i could keep some
- 3:24contact with science and still go to
- 3:26meetings and still learn
- 3:27things even if it was not connected to
- 3:30what i
- 3:31was interested in research-wise and
- 3:34the place where i could find that was in
- 3:36acoustic research for the navy and some
- 3:38oceanography work and material science
- 3:40and things like that
- 3:42so i just did a kind of a hodgepodge of
- 3:43jobs whatever i could find
- 3:46and of course science is science the
- 3:48same math shows up over and over again
- 3:50in all kinds of areas and so
- 3:52if you're looking for interesting
- 3:53problems you'll find them
- 3:55wherever you're working and for me the
- 3:58interesting problems
- 3:59turned out to be in areas of
- 4:02self-organizing processes that make
- 4:04engines
- 4:05and this is why there are no no wise
- 4:09young people
- 4:10in biochemistry because you have to
- 4:13memorize things
- 4:14for 70 years before you realize that the
- 4:17way it's organized is all quite simple
- 4:20and young people who have not been doing
- 4:22that for 70 years don't have that
- 4:23experience
- 4:25and i thought okay i'm never going to
- 4:26get anywhere on this because it's just
- 4:28it's a million facts and a million
- 4:30details and there's no big picture
- 4:32and it was there's more
- 4:36in that story but it's not interesting
- 4:37to tell
- 4:39when i went to the santa fe institute
- 4:42this is the importance
- 4:43of knowing people because you don't know
- 4:45what to look for
- 4:47but if you have a community and if they
- 4:49know you and they know
- 4:50others they will know who you should
- 4:52meet even if you don't know it
- 4:55and some people there said you need to
- 4:58meet harold morowitz because when you
- 5:00two talk you say completely different
- 5:02things but you sound exactly the same
- 5:05and so i met harold and harold said
- 5:08here's all this set of things in
- 5:11biochemistry that i'm sure
- 5:12are universal i'm sure they have a law
- 5:14like explanation
- 5:16but i don't have a mathematical way of
- 5:18approaching that question
- 5:20and i said i have this mathematics that
- 5:23i'm sure explains something but i don't
- 5:25know what to look for because all i get
- 5:26is human physiology and medicine
- 5:29and of course if you want to look at
- 5:30biochemistry
- 5:32starting with human physiology and
- 5:34medicine is like having this beautiful
- 5:36new telescope and saying well here's the
- 5:38big end i'll look in through the big end
- 5:40and you say i don't understand
- 5:41everything looks so far away
- 5:43well with the telescope you're supposed
- 5:45to start looking through the small end
- 5:47and if you look through the big end it
- 5:48doesn't do what it's supposed to do
- 5:50microbiology is the same way if you want
- 5:53to understand biochemistry
- 5:55you start with microbiology and the deep
- 5:57evolution of bacteria
- 5:58and then you can see the sense of the
- 6:00field unfolding
- 6:02and it's only late late lately and
- 6:04complicated when you get to human
- 6:06physiology and medicine
- 6:08so that the awareness of that
- 6:12and all of the things that harold had
- 6:14learned from 50 years
- 6:15he was an old man by the time i met him
- 6:17so he had time to become wise
- 6:21all of the accumulation of that
- 6:22knowledge that harold had gathered
- 6:25allowed us to pick out the things in
- 6:27biochemistry that should have law like
- 6:29explanations
- 6:31and then for me coming with mathematics
- 6:34and physics ideas
- 6:35i had things that i could start with
- 6:37that were not infinitely complicated
- 6:39they were fairly simple
- 6:40a few molecules a few pathways and that
- 6:43was enough to get us started working
- 6:45and that was the beginning of a 25-year
- 6:48collaboration i guess
- 6:49or close to it that led to the book that
- 6:52you guys found
- 6:53so it's very very circuitous
- 6:56so yeah just for our audience uh harold
- 6:59is your co-author
- 7:01and so you worked 25 years to write
- 7:04to write the book or close to it maybe
- 7:08maybe not 25 maybe
- 7:0917 something like that but long time
- 7:12yeah
- 7:13wow that so that's another thing i
- 7:14believe in i think that if you want to
- 7:17do
- 7:17interdisciplinary work you need to pick
- 7:21good collaborators you need to think of
- 7:23yourself as becoming their student
- 7:25and they will think of themselves as
- 7:27becoming your student
- 7:28and then you need to stay with them for
- 7:30a long time because it takes a long time
- 7:32to learn to think in new ways
- 7:34so you have to have patience and you
- 7:36have to trust each other
- 7:38and what were what were some of the
- 7:42the breakthroughs that came out of your
- 7:45collaboration
- 7:48well i'm not sure we ever had any
- 7:49breakthroughs
- 7:51but we were able to say some things that
- 7:53were kind of sensible
- 7:56which is good enough for me yeah
- 8:00the idea that
- 8:04harold had an idea for a long time since
- 8:06long before he met me and i don't think
- 8:08he came up with that i think gunther
- 8:09vector slicer in germany
- 8:11was one of the first people to see it
- 8:13and maybe even earlier than him
- 8:16but the citric acid cycle is certainly
- 8:20the organizing center
- 8:22of all biochemistry in all living things
- 8:25on earth
- 8:27if you try to do phylogenetic
- 8:30reconstructions sort of the deep history
- 8:32of ancient bacteria
- 8:34it's not easy to construct the citric
- 8:37acid cycle as a carbon fixation cycle
- 8:40all the way back to the beginning there
- 8:41are other pathways that look like
- 8:43they're easier to take all the way back
- 8:44to the beginning
- 8:46but those other pathways are not the
- 8:48organizing center of all of biochemistry
- 8:50and the citric acid cycle
- 8:52is and so
- 8:55if you're a physicist and you see that
- 8:59even when there's all this complexity
- 9:01and historical revision that living
- 9:02systems do
- 9:04but they always attach back to the same
- 9:06point
- 9:08your impulse is to think that that point
- 9:11has informational
- 9:12importance it's a kind of a an anchoring
- 9:15point
- 9:16that other things attach themselves back
- 9:18to and that requires an explanation
- 9:21if you work mostly in a historical field
- 9:24like
- 9:24phylogenetics you are
- 9:28you don't feel like you have to ask for
- 9:30a causal explanation because you can
- 9:32just say well it got fixed historically
- 9:34and then once it was locked in other
- 9:36things attract to it
- 9:38but you're not necessarily looking for
- 9:39cause
- 9:41if you're a physicist and you find an
- 9:43object
- 9:44you feel like you have an obligation to
- 9:46explain why that
- 9:47object came into existence
- 9:51and history may tell you part of the
- 9:54reason it played roles afterward
- 9:56but history may not be a complete
- 10:00account for why it existed in the first
- 10:02place
- 10:03and there were many people in santa fe
- 10:05you know my colleague walter fontana who
- 10:07brought me to
- 10:08santa fe who very strongly influenced my
- 10:11thinking in these ways
- 10:14you know um walter has a beautiful
- 10:16series of papers from long ago
- 10:20with leo bus with titles like the
- 10:23arrival of the fittest
- 10:25and he's saying you know darwin can
- 10:27explain to you why some things survive
- 10:29over other things once they exist
- 10:32but that doesn't address the separate
- 10:34question of how you come
- 10:36into existence when nothing of that kind
- 10:38had ever existed before
- 10:40and that's a problem that lives in
- 10:42another domain within science
- 10:44that also has to be solved so how do we
- 10:47go after that problem
- 10:51maybe there is a law of coming to
- 10:54existence
- 10:56or many yes oh okay so yeah oh yeah we
- 11:00know for a fact
- 11:01that so earth is about four and a half
- 11:04billion years old
- 11:06and apparently life has been around
- 11:10what or is consistent with our models of
- 11:12being around for
- 11:13around four billion years and they are
- 11:16the first half a billion
- 11:17it wasn't really possible chemically for
- 11:20life to form
- 11:22so as soon as it was possible for life
- 11:25to form it formed
- 11:27it's a reasonable guess yes is it
- 11:31are there other models there's a ton of
- 11:34uncertainty
- 11:35right um people are pretty confident
- 11:39that you have fully formed cellular life
- 11:41at 3.5 billion
- 11:44there are people who are willing to
- 11:45speculate you could go back to 4.1
- 11:48maybe um but
- 11:52that's 600 million years in which it's
- 11:55really hard to say that things are
- 11:58confident or can be even precisely
- 12:01described
- 12:023.8 still most people are reasonably
- 12:05confident
- 12:06they would be surprised if there were no
- 12:08life that early
- 12:09but that's the strongest statement a
- 12:11reasonable person will make is i would
- 12:12be surprised
- 12:14but it's not like it's not something
- 12:17like engineering trains
- 12:19where you really know what you're
- 12:20talking about with certainty it's a lot
- 12:22looser than that right yeah
- 12:25but it's still it was okay
- 12:29that would change things so are are you
- 12:32off
- 12:32the are you on the side of it being
- 12:37[Music]
- 12:38laws of nature that that force it to com
- 12:43that want life to come into existence or
- 12:46do you think
- 12:46it could have been a jackpot
- 12:50right you can't rule out the jackpot
- 12:54but i think in a science of historical
- 12:57phenomena
- 12:58ruling out the jackpot is not the
- 13:00correct goal
- 13:02um
- 13:05instead you say that there's a common
- 13:09there are many common signatures of
- 13:11things in nature that work in kind of
- 13:13the same way
- 13:16so it's not only how something comes
- 13:19into existence but how it behaves after
- 13:22it exists
- 13:23is it roughly stable does it tend to
- 13:26stand up if you poke at it or does it
- 13:28fall apart
- 13:30and the things that are unlikely to
- 13:31happen
- 13:33often are also fragile that's not true
- 13:36all the time
- 13:37um but you look for the signatures
- 13:40around something
- 13:42that suggests whether its origin is more
- 13:45lawful or more accident driven
- 13:48um and you try to make a preponderance
- 13:50of evidence argument
- 13:52i certainly
- 13:56it's so hard i apologize that my
- 13:58sentences are so long but it's so hard
- 14:00to speak carefully and say what you mean
- 14:03um if you ask me whether five fingers on
- 14:07the vertebrate hand
- 14:10are probably lawful
- 14:13i'm gonna guess no and i also know that
- 14:16it's not
- 14:17true because we have fish that have lots
- 14:20of vertebrate
- 14:21very verbal variability and
- 14:24we know how digits form and we know that
- 14:26it's a reaction diffusion pattern that
- 14:28lays down bone
- 14:30and so yeah so we have lots of ways of
- 14:32knowing that fingers on the hand
- 14:34are accidental if you ask me about the
- 14:38amino acids
- 14:40now we're starting to get into more
- 14:41complicated territory for some of the
- 14:44simpler ones like 12 or 13 of the
- 14:46simpler ones
- 14:48they are completely anchored around the
- 14:51citric acid cycle
- 14:53so while i don't know how accidental or
- 14:56how certain
- 14:57either one of them is i don't think we
- 15:00have two questions of
- 15:01accident i think we have one question
- 15:04and however certain one of them is the
- 15:06other one is almost
- 15:07exactly as certain but then you get to
- 15:10the other six or seven
- 15:12or eight depending on how you want to
- 15:14divide amino acids that are more
- 15:15complicated
- 15:17maybe there are some aspects of them
- 15:19that look more like the digits on the
- 15:21vertebrate hand
- 15:23in the sense that they have elements of
- 15:25things that couldn't really have been
- 15:27much different
- 15:27and elements of things that could have
- 15:29been
- 15:31but when you're faced with a situation
- 15:35like that
- 15:36you get up to a point where you know you
- 15:38can't make stronger statements with the
- 15:40things you know
- 15:42so then you go back to analyzing the way
- 15:44you argue
- 15:45and you say what is the weakest point in
- 15:47my argument what is the area where i get
- 15:50most
- 15:50stuck and where do i need to start
- 15:53looking for new evidence
- 15:56to find a better way of arguing in the
- 15:58place where my arguments are weakest
- 16:01and so for me that has meant you do the
- 16:04best you can you try to write a long
- 16:05book so that the arguments don't get
- 16:07lost
- 16:08and then you go back to the beginning
- 16:09and start over and you try to educate
- 16:11yourself in a new area
- 16:13and for us the new area was
- 16:15combinatorics of chemistry
- 16:18because the chemical possibility space
- 16:19is so large
- 16:22that if i look at metabolism i can tell
- 16:24you all the ways metabolism is special
- 16:28you know simple chemicals functional
- 16:30groups that are relatively easy to form
- 16:32with simple chemistry
- 16:34and when they're formed they create
- 16:36environments where similar reactions can
- 16:38act again
- 16:39so you don't need a lot of innovation to
- 16:42use that chemistry to build things up
- 16:44now there are important gaps questions
- 16:46nobody has a way to answer
- 16:49but i can tell you about how those
- 16:50things are special
- 16:52someone who doesn't think that means
- 16:54they're unique
- 16:55can say well chemistry is so big we're
- 16:58sure that similarly special things would
- 17:00be found in many other areas
- 17:03and i say how sure are you how big is
- 17:05chemistry
- 17:06and they say chemistry is very very big
- 17:09and i realize that we're not talking
- 17:11science anymore we're watching monty
- 17:12python
- 17:14right so clearly what both of us have to
- 17:17do
- 17:18is build tools to find out just how big
- 17:20chemistry is
- 17:23and it's right that chemistry is very
- 17:25very big
- 17:27and most questions you ask about it you
- 17:29don't
- 17:30really even have ways to systematically
- 17:32navigate the space
- 17:33they know and then they pick a point
- 17:36somewhere in the space and try to solve
- 17:38a problem
- 17:39and they do however well they can do and
- 17:41then somebody else who knows something
- 17:43else different will pick a point
- 17:44somewhere else in the space and try to
- 17:46solve a problem
- 17:48it's great it's much better than nothing
- 17:50and it's how we gain knowledge
- 17:52but if all you're doing is picking
- 17:54points here and there in the space
- 17:56you're limited by human intuition and
- 17:58experience
- 18:00and if different people have experience
- 18:02from different domains that doesn't
- 18:03really have a good overlap
- 18:06then you get these kind of unsatisfying
- 18:08conversations that origin of life has
- 18:10had for so many decades
- 18:12where person a believes hypothesis one
- 18:15person b believes hypothesis two
- 18:18and they have no way to address each
- 18:20other because they emphasize completely
- 18:21different things
- 18:22and there's no way for either one to
- 18:25productively engage with the reasons the
- 18:28other person
- 18:28believes something different and so at
- 18:31that point that's when you go back and
- 18:33you analyze the argument and you say
- 18:35we need better ways to navigate chemical
- 18:38space
- 18:39so that we can find out how big it is
- 18:41what is the null hypothesis
- 18:44how hard is the search for us doing
- 18:46science
- 18:47how hard was the search for nature
- 18:50having random processes
- 18:53waiting to stumble upon something that
- 18:55maybe has order
- 18:57and so we then go back to building tools
- 18:59and that's kind of where
- 19:00where a lot of us are these days i told
- 19:02you we had a
- 19:05student doing a presentation earlier
- 19:07this morning
- 19:08what she's working on is trying to
- 19:11estimate how big the chemical space is
- 19:13and how many
- 19:14kinds of molecules might have the kinds
- 19:17of special properties that biomolecules
- 19:19have
- 19:20and this is an area where 20 years ago
- 19:22the computational tools were not good
- 19:23enough
- 19:24to be of a lot of help so chemists
- 19:26largely were sort of scornful of them
- 19:28they thought well
- 19:30these are not helping us do what we know
- 19:31how to do well but the chemical tools
- 19:34have become a lot better
- 19:36and the chemists have gotten up to the
- 19:37edge of what they can do well
- 19:39with their own intuitive methods so that
- 19:42that handshake that collaboration is
- 19:44starting to become more productive now
- 19:46rapidly and so i think there's good work
- 19:48we can do in
- 19:49in those areas
- 19:53it would be interesting to to find out
- 19:56how
- 19:56big of a domain we're talking about
- 19:59because it it seems like based on what
- 20:02you're saying
- 20:03that we don't even know the magnitude of
- 20:06the problem
- 20:07of that's right right um
- 20:12so you i've and i also had you you said
- 20:14people say
- 20:15chemistry is big but
- 20:18you're you're a skeptical of the idea
- 20:22um no no no they're entirely right
- 20:25right okay the problem is that unless
- 20:28you can start to attach numbers to how
- 20:30big things are
- 20:32and unless you start to have the ability
- 20:34to navigate
- 20:35you're not in the domain of modern
- 20:36systematic science anymore
- 20:38you're back in the domain of natural
- 20:40philosophy and just exploring and hoping
- 20:42you stumble on something
- 20:46but you realize that you can't build
- 20:47bridges by hoping you stumble on things
- 20:50you you start your science always with
- 20:53natural philosophy and discovery
- 20:55but you have to move out of that phase
- 20:58into a phase
- 20:59where you say if i'm stuck and if we
- 21:02disagree
- 21:03we have to find a way to backtrack to
- 21:05the last thing we agreed on
- 21:07and figure out what's missing and how to
- 21:10find it
- 21:11with better than random chance and those
- 21:14are the methods that we now have to
- 21:16build up
- 21:18right it's more of a logical problem as
- 21:20opposed to
- 21:21this statement you you have to define
- 21:24big
- 21:24before starting to do any any research
- 21:28further right and and i
- 21:31i had used to talk about citric acid
- 21:34cycles could
- 21:34could you tell us what they are what we
- 21:37mean by citric
- 21:38acid cycles with regards to living
- 21:41things
- 21:42you bet so like everything else this was
- 21:45discovered backward
- 21:47um and it's not surprising right we live
- 21:49in the human world we see things that
- 21:51are big enough for us to see
- 21:53so we begin our discovery of everything
- 21:55from the human perspective but of course
- 21:59of course from the standpoint of life on
- 22:01earth the ecosystems where
- 22:02they become possible are highly
- 22:05interdependent and highly complex
- 22:08so anything that you see in the human
- 22:09world is going to be overwhelmingly
- 22:12colored by all the accidents of history
- 22:14that made that possible
- 22:16so the citric acid cycle was discovered
- 22:18in humans
- 22:20it is a cycle with 11 small molecules
- 22:24they had between two carbons and six
- 22:25carbons
- 22:28depending on how you count some people
- 22:30will count more you know 12 or 13
- 22:32if they look at the activated versions
- 22:34of some of the molecules
- 22:36um i'm counting 11 because i'm counting
- 22:39the carbon backbones
- 22:41you have 11 reactions that convert to
- 22:43carbon backbones
- 22:46it was discovered by hans krebs i think
- 22:48in 1935 or 37
- 22:50i forget the year
- 22:54and it was discovered to be the pathway
- 22:56that we use
- 22:57to break down either sugars or fats
- 23:02in the process of respiration we break
- 23:05them down into carbon dioxide that we
- 23:07exhale
- 23:09and then we use the energy from that
- 23:10breakdown to drive all the rest of our
- 23:12metabolism
- 23:13so without the citric acid cycle we have
- 23:15no metabolism we have no respiration we
- 23:17have no life
- 23:20it turns out it was not krebs first
- 23:23interest at the time because
- 23:25you have to realize how limited the
- 23:28tools of biochemistry are when he was
- 23:30working
- 23:31it was an astonishing accomplishment to
- 23:34figure out what this cycle was and how
- 23:36it worked
- 23:37with the tools available at the time but
- 23:39as we look from a modern perspective at
- 23:41the citric acid cycle
- 23:43you also realize that every chemical
- 23:46that is built not only by us
- 23:48but by any organism has a starting
- 23:51compound
- 23:52in the citric acid cycle so you look at
- 23:55the whole biosphere all these tens of
- 23:57thousands or
- 23:57hundreds of thousands of different
- 23:59compounds that are built
- 24:00organic compounds all of them start from
- 24:03one of four or five precursors
- 24:05in the same cycle which is astonishing
- 24:08right so it would it's more astonishing
- 24:11than the fact
- 24:12that every composition in literature is
- 24:16made out of the same letters
- 24:18because if your literature is english
- 24:20you have 26 letters
- 24:21and you have maybe 40 or 100 000 words
- 24:24that's a lot
- 24:26but it would be as if much more than
- 24:29everything in literature
- 24:31were made from only four letters or five
- 24:34letters
- 24:35and all of the words were built up from
- 24:37only that that's what bio
- 24:39that's how biochemistry is organized but
- 24:42if you look at the citric acid cycle as
- 24:44it was discovered
- 24:46in view of that biochemical organization
- 24:49it seems strange and it's hard to make
- 24:51sense of because as a respiratory
- 24:53process
- 24:54it takes in complicated molecules that
- 24:57are already complicated sugars or fats
- 25:00it breaks them down to carbon dioxide
- 25:02which is not organic and it's not
- 25:03complicated
- 25:05but then it uses the intermediates in
- 25:06the breakdown to build up everything
- 25:08else
- 25:10vitamins and amino acids and nucleotides
- 25:13and all that stuff
- 25:16so what will it be is it breaking down
- 25:18or is it building up
- 25:19well in us it's doing both and that's
- 25:21hard to understand
- 25:24so the discovery that was made much
- 25:26later in 1966
- 25:28by robert arnon and then um
- 25:34oh buchanan i forget the names
- 25:38it's the buchanan arnon paper you would
- 25:42think i would know these things but i've
- 25:43been doing math since january
- 25:45and my mind is in math world and i'm
- 25:47forgetting my my history and my facts
- 25:49we love our maths here don't worry yes
- 25:53um they discovered they were trying
- 25:56to understand how a species of bacterium
- 25:59was fixing carbon
- 26:01how it was taking in carbon dioxide and
- 26:04using it to make more complicated
- 26:06organic molecules
- 26:08and it's a photosynthetic organism but
- 26:09it was not using the calvin cycle
- 26:11which was how everyone believed
- 26:13photosynthesis worked
- 26:15and buchanan and arnon and a third guy
- 26:19whose name
- 26:20i feel bad because he was important too
- 26:21and i should remember his name
- 26:23well think of it evans
- 26:28what evans buchanan and were eventually
- 26:30able to work out
- 26:32is that this bacterium i think it was
- 26:34chloroflexus or antiquities
- 26:37was using the same molecules as the
- 26:39citric acid cycle
- 26:40and more or less the same reactions and
- 26:43it was running them in the opposite
- 26:44direction that we run it in
- 26:47so we take in sugar or fat
- 26:50we respire carbon dioxide and we use
- 26:53oxygen
- 26:54to break down those organics to co2
- 26:57which is where the oxygen and co2 is
- 26:58coming from
- 27:00to get energy they were taking energy
- 27:03from someplace else from photosynthesis
- 27:06they were taking in co2 instead of
- 27:08breathing it out
- 27:10and they were building up all of the
- 27:13molecules
- 27:14such as sugars and fats by running the
- 27:17reactions in the opposite direction but
- 27:20as soon as you look at that
- 27:22you say oh this one makes sense
- 27:25in humans it didn't make sense but in
- 27:27these bacteria it makes sense
- 27:29because it's all building they start
- 27:32from co2 they make two carbon compounds
- 27:35and three and four and five and six
- 27:36carbon compounds
- 27:38and they grow the carbon it's like fly
- 27:40paper the carbon is sticky and the co2
- 27:42attaches to it
- 27:44and out of that they make sugars and
- 27:46fats
- 27:47and they also make everything else they
- 27:49make all the vitamins they make all
- 27:50the amino acids they make all the
- 27:52nucleic acids
- 27:54and anything else more complicated made
- 27:56from those
- 27:57and so you say aha this is the thing
- 28:01that made sense and krebs himself i
- 28:03think in 1981
- 28:05was looking at the buchanan arnhem it's
- 28:08called the reductive citric acid cycle
- 28:10because it's
- 28:10it's consuming electrons we can come
- 28:12back to why it's called that if you want
- 28:15krebs looked at it and said this is the
- 28:17version that was on earth before the
- 28:19version i discovered
- 28:22my version happened after the original
- 28:24version
- 28:25which was a building up version
- 28:28got reversed and turned into a breaking
- 28:31down version
- 28:32to be a core of energy metabolism but
- 28:35that happened
- 28:35after there was oxygen on earth and
- 28:38after there was a way of reusing these
- 28:40compounds
- 28:42and now it is i would say universally
- 28:46believed that that's the correct
- 28:48understanding i'm sure you can find
- 28:49in fact i even know one you can find a
- 28:51scientist here there
- 28:53who wants to put krebs version of the
- 28:55cycle very very early on earth but in
- 28:58terms of what
- 28:59really reconstructs as the history of
- 29:01bacteria
- 29:02the deep history is that its
- 29:05role as a carbon fixation was early
- 29:08and then much later when it became
- 29:12useful to live in complicated ecosystems
- 29:14and break carbon molecules down
- 29:17and when you had sources of oxidants
- 29:20then it became productive to start doing
- 29:23more complicated stuff with the cycle
- 29:25running different parts of the pathway
- 29:27independently reversing the pathway that
- 29:29kind of thing
- 29:31so at least now the core structure of
- 29:34metabolism makes sense
- 29:36when viewed from a microbiology and a
- 29:38historical point of view
- 29:41and so what harold and i did together
- 29:43working for many years
- 29:46was to just try to get the common sense
- 29:48version of this
- 29:49picture worked out and to to hook it
- 29:52into the rest of metabolism and i should
- 29:54mention
- 29:55a wonderful junior colleague i had in
- 29:58the last several years of that work will
- 30:00hear brockman
- 30:01who's currently at mit rohir worked with
- 30:05me
- 30:06to understand when i had worked with
- 30:09harold we had mostly been
- 30:10concerned with the citric acid cycle and
- 30:12a few molecules around it the simple
- 30:14amino acids
- 30:15rohir worked with me and mo the primary
- 30:18work was really his all of the deep
- 30:20insights were his discoveries and the
- 30:22invention
- 30:22and most of the work was done by him to
- 30:25fill out how this became
- 30:28the core of all the rest of the
- 30:29innovations in carbon fixation
- 30:31and sort of the rest of core
- 30:33biochemistry
- 30:35so that was what we did for that period
- 30:37before i had to go back and sort of
- 30:39start to learn about chemistry as a null
- 30:41model with a new set of collaborators
- 30:43and a new set of projects
- 30:47um how do you define
- 30:50a living thing um
- 30:54because i know i've had many different
- 30:57definitions
- 30:59in fact um we i interviewed
- 31:03andrew noel two episodes ago and he told
- 31:06me oh i don't know
- 31:07what how to define it but i know it when
- 31:09i see it so
- 31:11could you tell could you tell us what
- 31:14your definition
- 31:16how you define how do you approach the
- 31:18problem
- 31:20your choice of words is just wonderful
- 31:22um
- 31:24because you started asking how i define
- 31:26a living thing
- 31:27and i was going to answer i don't
- 31:31but you already recognized in some sense
- 31:34you have an intuition for where the core
- 31:35of the problem is because then you
- 31:37changed your question you asked how do
- 31:38you approach the problem
- 31:40and the first question of defining the
- 31:42living thing is not a proper question
- 31:44the second question of approaching the
- 31:46problem is exactly the right question
- 31:49so now i'll give you a harangue you
- 31:50didn't ask for but it's one of my
- 31:52favorites
- 31:54great think about the expression living
- 31:57thing think about it as a linguist don't
- 31:59think about it as a scientist for now
- 32:02that sentence has a subject and a
- 32:05predicate
- 32:07the subject is the thing and the
- 32:09predicate is living
- 32:12but as a logician think about what a
- 32:14predicate is
- 32:17a construction of that form says the
- 32:19primary
- 32:20objects of our discourse are things
- 32:22anything we care about must start with
- 32:24things
- 32:26now i want to take the universe of all
- 32:27things
- 32:29and i want to group it into two sets the
- 32:31living ones and the not living ones
- 32:33and the predicate tells me which set i'm
- 32:35in
- 32:37so i will say in having chosen to frame
- 32:41the sentence that way
- 32:42people have committed what logicians
- 32:43call a category error
- 32:46because the starting point in the
- 32:49universe is not things
- 32:52and so if you start your sentence by
- 32:53committing to beginning with things
- 32:56you have already boxed yourself into a
- 32:58blind end that you can't escape from and
- 32:59there is no answer to that question
- 33:02because it treats living as a predicate
- 33:06of
- 33:06things as if things
- 33:10carried the property of life or not life
- 33:12within them
- 33:14and i know why we make this category
- 33:17error but it's a metaphor error
- 33:20so i you're interdisciplinary so i know
- 33:22i can lead you off on these tangents and
- 33:24you won't get bored instantly
- 33:26scientists tend to get bored instantly
- 33:27but younger people are better
- 33:29so we started in a sort of
- 33:33pre-aristotelian time
- 33:35we know about living in dead right these
- 33:38are the fish in the sea that are living
- 33:39these are the fish on the shore that are
- 33:41dead
- 33:42and if you're starting with fish it's
- 33:43perfectly fine to partition them into
- 33:45the live ones and the dead ones
- 33:48but that's living and dead in regard to
- 33:50the life cycle
- 33:52let's come into the aristotelian
- 33:54categorization
- 33:55and now we're not talking about living
- 33:57and dead within a life cycle
- 33:59we're talking about being part of the
- 34:01biosphere or being part of something
- 34:03that somehow is not the same as the
- 34:04biosphere
- 34:06that's not the same metaphorically
- 34:09it kind of resembles the living and dead
- 34:12but you know that a rock is not the same
- 34:14kind of a thing as a dead fish
- 34:17because a rock was never alive in the
- 34:19sense that the fish was once alive
- 34:23but if we take our living dead predicate
- 34:25for fish
- 34:26and we try to apply it to biosphere
- 34:28non-biosphere
- 34:30we're doing that by metaphor we're not
- 34:32doing it by science and we're not doing
- 34:33it by a careful understanding of what we
- 34:35need
- 34:37so i want to say that is the source
- 34:40of all the wrong turns that happened
- 34:42since is using that metaphor where it
- 34:44should not be used
- 34:46and starting with life as a predicate
- 34:50when life is not a predicate that's not
- 34:53that's not a survivable way to try
- 34:55to use the term so now let me replace
- 34:58having told you i think that's an error
- 35:01we never understand
- 35:02errors until we see something that we
- 35:03say is not an error
- 35:05and we can look back and say oh that's
- 35:06why the other thing was an error
- 35:08right like we didn't know there was a
- 35:10problem with newtonian gravity until we
- 35:11had einstein gravity to replace it
- 35:14we didn't know that classical mechanics
- 35:15was a problem until we had quantum
- 35:17mechanics to replace it
- 35:19so if i want to say that treating life
- 35:21as a predicate is a problem
- 35:23i have to tell you what i'm going to
- 35:24replace it by
- 35:26that is not a problem and that allows us
- 35:28to look back on it
- 35:31and i will say that the right answer is
- 35:35coming from
- 35:37the concept of phase transitions as we
- 35:40have spent the last hundred years
- 35:41discovering it in modern physics
- 35:45so if i give you one water molecule
- 35:49and i say oh is that a liquid water
- 35:51molecule or is that a vapor water
- 35:52molecule
- 35:54of course that can't be answered because
- 35:56the water molecule is a thing
- 35:59but the property of being a liquid or a
- 36:01vapor is not carried by that molecule
- 36:03it's not a predicate
- 36:04that you can use to sort the water
- 36:06molecules into the ones that are liquid
- 36:08and the ones that are vapor
- 36:10because being a liquid or a vapor is a
- 36:12property of relations
- 36:14not only of a finite number of water
- 36:17molecules to each other
- 36:18but of an indefinitely large collection
- 36:21of water molecules that work together
- 36:23to maintain the structure of relations
- 36:27so liquid is a phase vapor is a phase
- 36:31and i had someone remind me just earlier
- 36:33this week
- 36:34that when the greeks were looking for an
- 36:36atomic theory of
- 36:38nature they didn't get the atoms right
- 36:41but they realized the phases and they
- 36:44got those right
- 36:45so think of what earth water air and
- 36:47fire are
- 36:49they are the solid the liquid the vapor
- 36:52and the plasma phases
- 36:55wow pretty impressive
- 36:58but also a lesson for all of us that
- 37:02it took us thousands of years to go
- 37:04through all of our physics of objects
- 37:07go through phase transitions the
- 37:09discovery of thermodynamics the
- 37:10discovery of quantum field theory
- 37:12the renormalization group and the modern
- 37:15theory of matter
- 37:17and at the end of all of that we now
- 37:20have a theory where we realize it's
- 37:22actually all distributions and phases
- 37:25everything we thought was an object we
- 37:26now explain in terms of distributions
- 37:29in the modern quantum field theory of
- 37:32matter and phase transitions and
- 37:34renormalization group sorry for all this
- 37:36technical jargon but all
- 37:37i love it i love it i will reward you at
- 37:40the end
- 37:43we find out that the most reliable
- 37:46things in our ontology
- 37:48are the same kinds of things that were
- 37:50most recognizable to the greeks so long
- 37:53ago
- 37:54though we know about many more of them
- 37:56now they are the phases they are the
- 37:58stable structures of relations
- 38:01so now let me come back to the question
- 38:03about life on planets
- 38:07we think we can reliably imagine planets
- 38:10without life
- 38:12certainly if you get hot enough and
- 38:13molten enough you don't have organized
- 38:15organic chemistry we're sure we're safe
- 38:16there
- 38:17so deep in the hadean earth must have
- 38:19been that way for a while
- 38:21we can look at venus we can look at mars
- 38:23they probably are planets without life
- 38:25now venus really good bet mercury even
- 38:28better bet
- 38:29mars less certain but still probable i
- 38:32would say
- 38:33and then we can look at the earth and
- 38:35clearly the earth has a biosphere
- 38:38so now i can say what is the major
- 38:41difference between a planet without a
- 38:42biosphere and a planet with a biosphere
- 38:45what is the robust thing that no matter
- 38:48what happens
- 38:49never changes so think of all the things
- 38:52on earth that have changed
- 38:54you know maybe once there was only rna
- 38:57now there's rna and dna maybe once there
- 39:01were only bacterial and archaeal cells
- 39:03now there are eukaryotic cells
- 39:05once there were only unicellular
- 39:07organisms now they're multicellular
- 39:08organisms
- 39:10ecosystems grow everything gets turned
- 39:12over there's this constant darwinian
- 39:14churning
- 39:15and then there are innovations that get
- 39:16made once there was no oxygen on the
- 39:18surface now there's major oxygen on the
- 39:20surface that changes everything
- 39:24in all of that in planets without life
- 39:28your organic chemistry always lives over
- 39:30in one corner of the chemical space
- 39:34where it's dominated by things that are
- 39:35relatively near equilibrium
- 39:37or whose complexity is of a limited form
- 39:40and it tends to be dominated by things
- 39:42that are messy
- 39:43meaning that if you have a molecule of a
- 39:45certain size or certain structure
- 39:47you probably have lots of other
- 39:49molecules that are of similar size or
- 39:50structure to it
- 39:53if i compare that to a planet with a
- 39:55biosphere
- 39:57planet with a biosphere has huge
- 39:59concentrations
- 40:00gigatons of carbon in only a very small
- 40:04number of molecular species
- 40:06and the ways those molecular species are
- 40:08made are even smaller they're all built
- 40:11up from these four
- 40:12tiny intermediates so there's extreme
- 40:15complexity in that
- 40:17in that you have large molecules
- 40:19structured molecules and high
- 40:20concentrations
- 40:23extreme concentrations of exact
- 40:25molecular species
- 40:27and very low concentrations of things
- 40:29that are fairly close neighbors of them
- 40:31and you would think are similar and if
- 40:33instead of just looking at the molecules
- 40:35you look at the pathways by which
- 40:37they're made
- 40:38the selectivity is even more extreme
- 40:41than it is for the substance
- 40:43that property of a planet with a
- 40:45biosphere has never changed
- 40:47even as everything else about cellular
- 40:49organization
- 40:51and so if i look at that i say as a
- 40:54physicist
- 40:56that looks to me like a phase change
- 40:59because there was a structure of
- 41:00relations in planets without life
- 41:03and there's a new structure of relations
- 41:05and planets with life
- 41:07it's not maintained by any one molecule
- 41:10or any one cellular form or whatever
- 41:12it's maintained by the whole thing
- 41:13together
- 41:15and it's very robust very
- 41:17self-maintaining
- 41:19and interestingly enough the identities
- 41:22and the roles of these molecules
- 41:24they're not attached in a reliable way
- 41:26to species different species will be
- 41:27handling different parts of this traffic
- 41:30but at the ecosystem level they're very
- 41:32regular they're very reliable
- 41:34this is what the early papers that
- 41:35harold and i were publishing on
- 41:37tried to emphasize though many other
- 41:39people besides us also have seen it
- 41:41in the same forms so then let's come
- 41:45back
- 41:46and let's ask well wait wait we started
- 41:47talking about things you have to at
- 41:49least say something about
- 41:50things and i say well think of how much
- 41:53is going on in the biosphere
- 41:55you have all these molecules and their
- 41:57roles little ones you have
- 41:59macromolecules
- 42:00peptides and rnas and dnas and all that
- 42:04stuff
- 42:04you have cells and all the cellular
- 42:07compartments
- 42:08you have all the relations among members
- 42:10and ecosystems
- 42:12all of those things are contributing to
- 42:14the robustness of the biosphere
- 42:17in all of that what is a cell what is an
- 42:20individual
- 42:21it's one architectural motif
- 42:25so if i single out the organisms the
- 42:28right question is to say
- 42:30why are organisms such an important
- 42:32architectural motif
- 42:34for a living system so now i'm not
- 42:38saying
- 42:38the property of life is a property of
- 42:41the thing
- 42:42i'm saying the thing is a hugely
- 42:44important architecture
- 42:46in maintaining the living state at the
- 42:48level of the biosphere
- 42:51and then we ask questions why does
- 42:53individuality emerge
- 42:55how many kinds of individuality are
- 42:57there what is the nature of
- 42:58individuality
- 42:59and then you realize there's tons of
- 43:01stuff we know in biology
- 43:02right so i have cells and the cells have
- 43:06genomes and the genomes stay at home
- 43:09viruses are genomes that don't stay at
- 43:11home they come and live in somebody
- 43:12else's cell and then when they make a
- 43:14mess they leave
- 43:16so there are at least two forms of
- 43:17individuality there's the individuality
- 43:19of
- 43:20metabolism and bioenergetics in the cell
- 43:23and then there's the individuality of a
- 43:24genomic life cycle which may or may not
- 43:26be attached to itself
- 43:28and i can go on and on like this and
- 43:30then you realize there's lots of stuff
- 43:32going on
- 43:33in the architectures of individuality
- 43:37all of those are parts of the dynamic of
- 43:39the biosphere
- 43:40but they are not carrying the property
- 43:42of living or not living it's their
- 43:44participation
- 43:45in the biosphere that allows them to
- 43:48inherit
- 43:50this distinction between a planet with
- 43:52life and a planet without life
- 43:54so i would replace the living thing
- 43:56predicate
- 43:57with the biosphere as the carrier of the
- 43:59living state
- 44:01so far so good yep yeah this
- 44:04is the deepest conversation we've ever
- 44:07had on this podcast just for the record
- 44:10very very interesting though right so
- 44:13yeah you've essentially
- 44:15shown me that the very framing of the
- 44:17question
- 44:18has built in assumptions that are false
- 44:22that we're not looking at it from the
- 44:24right we've just seen
- 44:26i think the idea might come from the
- 44:28idea of a
- 44:29spirit something has a spirit something
- 44:31is either living or dead
- 44:33but it's actually part of the greatest
- 44:36system
- 44:37and it participates in right
- 44:40wow a fun fact about that yes please
- 44:44your intuitions are wonderful and the
- 44:46thing that's best about being a
- 44:47scientist
- 44:48is that of course intuitions can always
- 44:50be wrong but we know we should go
- 44:52looking for evidence
- 44:54and then we can find out whether the
- 44:55intuition was in fact right or was
- 44:57spurious
- 44:59so one of the areas where i had the
- 45:01complete joy of spending a lot of years
- 45:03working
- 45:04is the history of human languages and
- 45:05how they go back
- 45:07and of course if you look at languages
- 45:10across the indo-european family
- 45:12you immediately recognize that they're
- 45:13all these cognates of you know common
- 45:15words so the word two is the same
- 45:17everywhere in indo-european it's had
- 45:19hundreds of thousands of years of
- 45:21individual descent but it hasn't changed
- 45:23the word nephew is almost entirely
- 45:25preserved
- 45:27whereas the words for butterflies and
- 45:28the tales of animals change all the time
- 45:32but there's an interesting one where you
- 45:35could say
- 45:36well what is the indo-european root for
- 45:38the word for animal
- 45:40it seems like a decent question
- 45:43it turns out it's not a well-formed
- 45:45question
- 45:47and here's what we know about it let's
- 45:50take english because i think i can
- 45:51remember the facts without getting lost
- 45:53in english
- 45:54we have two words well we have two words
- 45:57for everything in english right
- 45:59because english is an you know western
- 46:02germanic language that then got all of
- 46:04latin laid on it through norman french
- 46:06so it has two copies of the vocabulary
- 46:09and if you want a completely wonderful
- 46:11discourse on this read
- 46:12jorge luis borges about shakespeare and
- 46:15about how shakespeare uses those two
- 46:17copies of the vocabulary
- 46:19to set up tension and release it but i
- 46:21won't go on that tangent right now
- 46:24but just think about our two copies of
- 46:26the vocabulary in english
- 46:28for the words for animal one of them is
- 46:30animal
- 46:31one of them is beast
- 46:35if you trace those back animal of course
- 46:37came from the latin
- 46:39and so it's the latin word for these
- 46:41things beast comes from the germanic
- 46:44and it's the substratum word
- 46:48maybe it becomes it may have come in
- 46:50from some other funny direction like
- 46:51irish i forget
- 46:53but eventually the the unraveling of the
- 46:56story is that if you work
- 46:57back in ancient indo-european
- 47:00in proto-indo-european as spoken by
- 47:02people at the time there was not a word
- 47:04for animal
- 47:06there were two different words one of
- 47:08which i believe
- 47:10is reconstructed as deuce which has to
- 47:13do with wildness and dangerousness
- 47:16and through various things that came
- 47:19down for the beasts the wild animals
- 47:22the other is anae which was breath
- 47:26or spirit or soul and the domesticated
- 47:29animals were on a they were not the
- 47:31dangerous ones they were the ones that
- 47:32wouldn't kill you and you could eat them
- 47:35and then the deuce were the wild ones
- 47:37that were dangerous
- 47:40and so in modern language we have chosen
- 47:42to make a separation between the
- 47:44two-legged animals and all the other
- 47:45animals
- 47:46and so we think there's a word for
- 47:48animals separate from human
- 47:50but if you reconstruct you find that the
- 47:52categories apparently were different
- 47:54and they were indeed the difference
- 47:56exactly the difference you proposed
- 47:58between things that you counted as
- 48:00having spirit or soul or being safe
- 48:02and the things that were wild or
- 48:04dangerous in
- 48:06the surrounding hostile world so i think
- 48:09there's
- 48:09good evidence for your intuition that
- 48:12this is how human minds tend to think of
- 48:14these things and parse them
- 48:17yeah i i was listening very carefully
- 48:19because i i'm persians
- 48:21i was waiting to see if if any of them
- 48:23register
- 48:25you'll find them because of course um
- 48:28indo-ironic is then
- 48:29one of the branches within a
- 48:31indo-european yeah i don't
- 48:33know enough persian or farsi
- 48:37vocabulary to immediately have good
- 48:39examples of springtime
- 48:41but there are dozens of these things
- 48:43brother mother i think they're
- 48:45they're pretty much the same like
- 48:47[Music]
- 48:49moon moon divers between
- 48:52english and parisian at least yeah
- 48:55probably moon in indic is
- 48:58chand it comes from the word for shine
- 49:01or a dewdrop
- 49:03oh so you have all these things like
- 49:05chandrasekhar
- 49:07um family names and things like that
- 49:12so that that may have been a word shift
- 49:14a lexical displacement
- 49:17and i've had the the word locks locks
- 49:21apparently
- 49:23like that has some indo-european roots
- 49:25as well
- 49:26it's an ancient route for salman right
- 49:30yes interesting very intimate maybe we
- 49:33can dedicate another episode to the
- 49:36indo-european okay
- 49:39um so
- 49:43you know when we talk about um biosphere
- 49:46isn't our problem so when you say you
- 49:49know
- 49:50when you talked about the properties of
- 49:52biosphere
- 49:53is in our problem that we only have a
- 49:56sample size of
- 49:57one biosphere
- 50:00people like to say that i don't favor
- 50:02that way of saying it so much
- 50:04right um when i gave you that awful
- 50:07long-winded diatribe about
- 50:09living things one of the reasons
- 50:12it's important to me to recognize it as
- 50:14a category error
- 50:16is that when we make the category error
- 50:18there's all this stuff that we
- 50:20know in science that we understand well
- 50:22that it doesn't occur to us to use
- 50:25whereas when we set the categories out
- 50:27in the right way
- 50:29i think we're more attentive to the fact
- 50:31that all this other scientific knowledge
- 50:33is actually informative about how to
- 50:34pose the question
- 50:36and i think the same way about this one
- 50:38sample not one sample thing
- 50:41yes in a sense our biosphere
- 50:44is all connected it's all connected by
- 50:46common descent as far as we can tell
- 50:49that was such a big discovery when it
- 50:52came out
- 50:53that it kind of swept everything else
- 50:55off the board
- 50:56and you know we still have all of this
- 50:58social conflict people trying to say you
- 51:00know common descent is not
- 51:02a gigantic problem to accept it's sort
- 51:05of overwhelmingly clear
- 51:07and then there are people who don't like
- 51:09it and are constantly in tribal fights
- 51:10against it and so forth
- 51:12that's the last war that's a war that
- 51:14should have ended 100 years ago
- 51:15or 150 years ago because it's not hard
- 51:20but the problem is when you're so
- 51:23focused on the common descent part
- 51:26you realize that some things may not
- 51:29happen
- 51:31they may be common descent
- 51:34but the reason they're there may not be
- 51:37that they're locked in
- 51:38and preserved it may have been that they
- 51:41were so much easier to do that nothing
- 51:43else ever was really in play
- 51:45so if i'm in an airplane and i fly over
- 51:47the desert
- 51:49i don't see trees scattered here and
- 51:51there throughout the dry land
- 51:53with tap roots 400 meters deep to reach
- 51:56the water
- 51:57instead i see that there are river ways
- 51:59and they're crowded with trees because
- 52:01the trees can get the water right up at
- 52:02the surface
- 52:04and then everywhere else where there's
- 52:05not river there are no trees
- 52:07so if you're going to be a tree you're
- 52:08going to be a tree where it's easy to be
- 52:10a tree
- 52:12and in the same sense if i look at the
- 52:14biosphere and biochemistry and i see
- 52:17everything concentrated in around a few
- 52:18molecules and a few reactions
- 52:21my impulse is to think okay what we see
- 52:23are the trees
- 52:25what we want to understand is what what
- 52:27are the rivers that we're not
- 52:28recognizing to look for
- 52:30the sort of paths of least resistance
- 52:32where it's easy to be a molecule
- 52:36so the evolutionary view of life looks
- 52:39at molecules and asks what are they good
- 52:40for doing
- 52:42as a chemist or a physical chemist or a
- 52:46statistical physicist
- 52:48if you look at the same molecules you
- 52:50have the impulse to ask what is the
- 52:52molecule good at being
- 52:54as opposed to what is it good for doing
- 52:57and of course a molecule carries both of
- 52:59those sides it's a coin that has both a
- 53:01front and a back
- 53:03in order to exist it's easier if it's
- 53:05something that it's good at being for
- 53:07carbon
- 53:08in order to be important it survives
- 53:12if it has evolutionary consequences that
- 53:14it's good for doing something
- 53:17if we ask what are the components of
- 53:20life good at
- 53:21being then the answer to that for life
- 53:24on earth may not be just one thing it
- 53:26may be many things
- 53:29and as we come to better understand the
- 53:31landscape of chemistry
- 53:32and we learn to apply some of our tools
- 53:34of statistical physics for thinking in
- 53:36that complicated landscape
- 53:38which is a much harder place to work
- 53:40than any place physics has ever worked
- 53:42before
- 53:44we may find that there's tons of
- 53:45information in the biosphere and it's
- 53:47not a sample size of one
- 53:48it's a sample size of many many many
- 53:52so i want us to be attentive to looking
- 53:54for all the other places in science
- 53:56where we know how to ask questions
- 53:58but we have not been asking those
- 54:00questions of the biosphere before now
- 54:02because we were framing the problem in a
- 54:04way that caused us to ignore them
- 54:07and for a hundred years in your opinion
- 54:11for the entire history of humanity oh
- 54:13wow
- 54:14the the evolutionary insight
- 54:19as a mathematical insight or a
- 54:21scientific insight it should not have
- 54:22been remarkable
- 54:24right because mathematically it's
- 54:25ordinary scientifically as ordinary
- 54:28the thing that that makes darwin's
- 54:31science
- 54:32superb is that he had the big mind
- 54:37of
- 54:41what an ecologist a physiologist a
- 54:43geologist
- 54:44all at the same time he kept all that
- 54:47complexity in mind and he was aware of
- 54:49the rich
- 54:50able to distill that there were paths of
- 54:52causation that you could see
- 54:54amid all of the complexity that makes
- 54:56them hard to see
- 54:58that's what you get from reading the
- 55:00original science
- 55:01the idea that you can start with prior
- 55:04variation and you can filter it to get
- 55:07things
- 55:07that are better fitted to their
- 55:09environment mathematically that could
- 55:11have been done
- 55:11400 years earlier the bernoulli brothers
- 55:13could have understood that
- 55:15because the gambler's ruin problem
- 55:16already has the seeds of all of that
- 55:18solution
- 55:18in it and that was bernoulli and fema
- 55:21and pascal and all those guys
- 55:23so that's not the interesting part of
- 55:25evolution
- 55:27there are a few simple things that we
- 55:28should have just solved and moved on
- 55:30from
- 55:31within the last 150 years but
- 55:34the thing about not knowing where to
- 55:37look for questions that's human
- 55:39and that goes back our entire history
- 55:41and it's just going to be a problem
- 55:43forever because it's how human minds
- 55:46work so the problem of discovery
- 55:49in areas where you don't understand is
- 55:51just a fundamental problem of how to use
- 55:53minds
- 55:53to do science
- 55:58and do you think so if you if you could
- 56:01go back in time and with without any of
- 56:04your
- 56:04knowledge but if you could propose
- 56:08the questions that we are able to
- 56:10propose now
- 56:13we would we would be in a much better
- 56:15off situation
- 56:17if we were thinking about better
- 56:20questions
- 56:23i'm not sure um
- 56:27i think they're somewhere in tolstoy's
- 56:29warrant piece
- 56:32where he says
- 56:35somebody is speaking on behalf of
- 56:37somebody i don't know if it's one of the
- 56:38characters or if it's the narrator or
- 56:40who but somebody
- 56:41because this is all 30 years ago for me
- 56:44but somebody says why don't we just
- 56:46write the cliffs notes to war and peace
- 56:48and tell
- 56:49you know who did what and then we'll
- 56:51have it done
- 56:52and tolstoy's point is that that's not
- 56:54where the reality of life is carried the
- 56:56reality of life is carried in all the
- 56:58actual stories of how things really
- 56:59happen
- 57:00and how people really are and so the
- 57:03summary of the plot
- 57:05is just a structuring device but the
- 57:07substance of the story
- 57:08is in the experiencing of all of these
- 57:11complicated
- 57:12realities i think it's the same in
- 57:15science
- 57:16i think if you were to go back to
- 57:18galileo's time
- 57:21and show him a jetliner you know none of
- 57:24his flying machines would have worked
- 57:27and if you had shown him this enormous
- 57:28lump that looks like a building and is
- 57:30actually a 747
- 57:32and said you know however many hundreds
- 57:35of years later
- 57:36this thing will take off and go up into
- 57:38the air
- 57:41galileo could have sort of distantly
- 57:44glimpsed that such things would be
- 57:48conceivable
- 57:50but there's no way he could have had the
- 57:51kind of operational understanding that a
- 57:53child
- 57:54can have today of all the different
- 57:56engineering components that make that
- 57:58real so i think you have to
- 58:03you have to go through the phenomenology
- 58:06all the nuts and bolts of discovering
- 58:08the details of how things work and it's
- 58:10only after you have that
- 58:12lived experience that you can look back
- 58:15and you can put eclipse notes over it
- 58:18which is what theory does
- 58:20and say this is an abstraction that
- 58:22allows you to navigate
- 58:24all of that complicated space without
- 58:26getting lost
- 58:28but the abstraction is not a substitute
- 58:30for all of the sort of
- 58:32content detail that the abstraction
- 58:35puts into nice orderly packages
- 58:41well um
- 58:44yeah this this is yeah again it's very
- 58:48philosophically deep so could you tell
- 58:52us about the
- 58:53the thesis of your book about
- 58:56the about the biosphere being the
- 59:00fourth geosphere what do you mean by
- 59:03that
- 59:04in some sense it's the it's the thing
- 59:06that we put up as the alternative to
- 59:08living things
- 59:10where you say
- 59:14i would never ask about a water molecule
- 59:16whether
- 59:17it is liquid or gas in the same sense i
- 59:21can't ask whether a water molecule on
- 59:23earth
- 59:24is carrying the essence of the solid
- 59:28earth or the oceans or the atmosphere or
- 59:30life
- 59:31because one water molecule can go
- 59:32through all of those things
- 59:35but if i wanted to understand the earth
- 59:37i would certainly want to understand
- 59:39that it has these major domains it has
- 59:41the bulky rocky domain that does certain
- 59:43things certain kinds of chemistry and it
- 59:45anchors the planet's geometry
- 59:47and then there's a little bit of water
- 59:49on the surface that's a different phase
- 59:50and has different chemistry
- 59:52and then there's the atmosphere which
- 59:54does yet other things it interacts with
- 59:56sunlight in different ways than the
- 59:57ocean or the rock does
- 59:59and then there's the biosphere that
- 1:00:01occupies this whole
- 1:00:02other area of biochemical process of
- 1:00:05organic chemical process
- 1:00:06that the other three don't and so you
- 1:00:09could say okay
- 1:00:10in terms of getting a crude look at the
- 1:00:12hole which is the way mary gelman likes
- 1:00:14to express these things
- 1:00:17you would first recognize that there are
- 1:00:19these major phases
- 1:00:21and that the details are organized in
- 1:00:23communities within the major phases
- 1:00:26and you could say okay how much of the
- 1:00:28information is being carried in the
- 1:00:29major phase
- 1:00:31just the fact that this is in the bulky
- 1:00:33rock or that it's in the ocean or
- 1:00:34in the atmosphere or in the biosphere
- 1:00:37and then you could say okay how much is
- 1:00:39left out the major phases are only
- 1:00:41carrying
- 1:00:42part of the information what do we need
- 1:00:43to understand next
- 1:00:45what's carried in the ecosystem what's
- 1:00:47carried in the individual
- 1:00:49and then you work your way down within
- 1:00:50the individual how much is carried in
- 1:00:52the fact that it's cellular and it has a
- 1:00:54genome
- 1:00:55how much of it is carried in the life
- 1:00:56cycle how much of it is carried in the
- 1:00:58ecological relations and what maintains
- 1:01:01them
- 1:01:02and so the thesis of the book is just
- 1:01:05i should argue that the book is not
- 1:01:08supposed to be mainly important for its
- 1:01:10thesis
- 1:01:12the book is supposed to be mainly
- 1:01:14important as a tool to allow people to
- 1:01:16work in this area
- 1:01:18because if you think the way i do about
- 1:01:20doing origin of life work you would
- 1:01:24believe that you can't do the best
- 1:01:26possible work
- 1:01:27or the most original work by working
- 1:01:30only in one domain
- 1:01:32because life didn't care about our
- 1:01:34academic domains it is whatever it is
- 1:01:36and it draws from all of these processes
- 1:01:39so if we want a science of life that is
- 1:01:41faithful to the nature of life
- 1:01:44we want to be attentive to where all of
- 1:01:46these other processes are part of the
- 1:01:48correct scientific description
- 1:01:50but then if someone points you to a
- 1:01:52library and says go learn
- 1:01:54how are you ever going to start you have
- 1:01:56hundreds and thousands of linear feet of
- 1:01:58papers
- 1:01:59most of it's wrong a lot of it's junk
- 1:02:02it'll take you forever
- 1:02:03how do you start so the point of the
- 1:02:05book was to try
- 1:02:06to reduce the cost of entry by saying we
- 1:02:10can tell you a story we can introduce
- 1:02:12you to the literature and we can do it
- 1:02:13consistently
- 1:02:15across several different domains
- 1:02:18geochemistry
- 1:02:19organic chemistry biochemistry
- 1:02:21physiology
- 1:02:22some bits about evolution statistical
- 1:02:24physics
- 1:02:25information theory control theory
- 1:02:28and we can show you that this is not
- 1:02:30incomprehensible and it doesn't
- 1:02:32it doesn't require longer than a
- 1:02:33lifetime to read and we can give you a
- 1:02:36starting point in that reading
- 1:02:38and that way if you want to work in this
- 1:02:40area you don't have to be old before you
- 1:02:42begin
- 1:02:42you can start while you're still young
- 1:02:43and get something done
- 1:02:46but then within it the the sub thesis
- 1:02:48was
- 1:02:50just that one that the nature of the
- 1:02:52living state is carried by the biosphere
- 1:02:54as a whole
- 1:02:55that there are good arguments to think
- 1:02:58of it as a kind of a dynamic phase
- 1:03:00transition
- 1:03:01and then we ask the question what
- 1:03:03architectures make that phase transition
- 1:03:05possible
- 1:03:07what is the importance of chemistry as a
- 1:03:09substrate
- 1:03:11what is the importance of
- 1:03:12cellularization or other things as an
- 1:03:13important architectural motif
- 1:03:15how can we break the question down in
- 1:03:17such a way that it's sensible and
- 1:03:18tractable
- 1:03:21um how how would you imagine
- 1:03:24if earth had a different ecology
- 1:03:27uh how do you imagine so
- 1:03:31how different do you think life could
- 1:03:33have formed on a fundamental level
- 1:03:37i would love to know how to ask that
- 1:03:39question and i don't
- 1:03:41all right so this is the issue of how
- 1:03:43big is chemistry
- 1:03:45um so we have all these the thing that's
- 1:03:48amazing about chemistry on earth is that
- 1:03:50it allows
- 1:03:51so many layers of complexity to be built
- 1:03:53one on top of another on top of another
- 1:03:56so the most fundamental question is how
- 1:03:58many domains within chemistry
- 1:04:00even support that kind of elaboration of
- 1:04:02complexity
- 1:04:05we have the earth it's the easiest place
- 1:04:07to do experiments we can do chemistry at
- 1:04:10will
- 1:04:11we don't we can't reproduce what somehow
- 1:04:13has happened on the earth
- 1:04:14so we're missing fundamental things even
- 1:04:16there even with the chemistry we can see
- 1:04:19even with the chemistry we can do
- 1:04:20experiments on we don't know what we
- 1:04:22haven't asked in the right way
- 1:04:25now to ask to answer the question that
- 1:04:27you posed
- 1:04:28which is what we have to do if we're
- 1:04:30going to do planetary exploration
- 1:04:32you say go to some planet or some moon
- 1:04:34whose chemistry is off somewhere else
- 1:04:36here
- 1:04:39is it capable of being interesting in
- 1:04:42the way biochemistry is
- 1:04:43interesting when we don't know how to
- 1:04:46answer that question even for the most
- 1:04:48accessible chemistry we have
- 1:04:49how do you do the counter factual that's
- 1:04:52where you have to have theory
- 1:04:54you have to get you have to learn what's
- 1:04:55in the chemical space and learn how to
- 1:04:57systematically explore it
- 1:04:59preferably guided by needing to get the
- 1:05:01correct answers for the chemistry we
- 1:05:03already have on earth which we still
- 1:05:05can't do
- 1:05:06so that's how hard that question is and
- 1:05:09i i have a
- 1:05:10question about theories i think you'd be
- 1:05:13i've had this for a while i think you'd
- 1:05:15be the right
- 1:05:16person to ask so you know in physics i
- 1:05:19feel
- 1:05:20when we say theory it's much more
- 1:05:23established hard
- 1:05:24fact than for example in other
- 1:05:27sciences when we say theory they're much
- 1:05:30more fragile
- 1:05:32um yes since you're good with words
- 1:05:36how am i do i have a point or am i just
- 1:05:40you entirely have a point yes um
- 1:05:44this is a challenge which is that the
- 1:05:47language of science
- 1:05:49always draws words from the common
- 1:05:51language
- 1:05:52but then it gives them very particular
- 1:05:54meanings within the scientific domain
- 1:05:56that they did not have in the common
- 1:05:57language
- 1:05:59and so in the common language most
- 1:06:02words don't have
- 1:06:05what i would call operational
- 1:06:07definitions
- 1:06:09you know if you take word like cat or
- 1:06:11dog or cow
- 1:06:12that's pretty concretely defined you
- 1:06:14know what yes or is not a cat israel is
- 1:06:16not a dog if you take a word like
- 1:06:19emergence or theory or belief
- 1:06:23those do not have similarly concrete
- 1:06:26definitions
- 1:06:28they often are sort of metaphors layered
- 1:06:29on top of metaphors
- 1:06:31the most you get is what the linguist
- 1:06:35vygotsky called family resemblances
- 1:06:38where words tend to kind of cluster
- 1:06:40together because in a way they seem to
- 1:06:43kind of refer to the same thing
- 1:06:46and so the word theory in the common
- 1:06:50language
- 1:06:52has this flavor of something ventured or
- 1:06:56tentative and
- 1:06:57uncertain and hypothetical
- 1:07:02within science that usage has mainly
- 1:07:05been taken over by the word hypothesis
- 1:07:09many sciences do not actually have
- 1:07:12anything
- 1:07:13that fills the role the theory fills in
- 1:07:17physics
- 1:07:20physics in some sense occupies the
- 1:07:23domain of the simplest problems people
- 1:07:25could find
- 1:07:26and therefore the problems that we have
- 1:07:27the strongest lock on
- 1:07:29they tend to be the problems that are
- 1:07:31the best reducible
- 1:07:33in the sense that there's a there's
- 1:07:35little enough complexity
- 1:07:36in them that you can break the parts
- 1:07:39apart you can understand the parts
- 1:07:41you can then understand the rules of
- 1:07:42assembly you can understand the new
- 1:07:45aspects of irreducible
- 1:07:47organization that come from the rules of
- 1:07:49assembly but you can know
- 1:07:51how the composites are constrained by
- 1:07:53the parts
- 1:07:54and so physics has largely consisted of
- 1:07:56the problems that submit well to being
- 1:07:58solved by that
- 1:07:59kind of method so they're simple in a
- 1:08:02certain important fundamental sense
- 1:08:04even if some things like gravitational
- 1:08:06waves
- 1:08:07are extraordinarily difficult
- 1:08:09technically or the higgs boson
- 1:08:11to get measurements on the principles
- 1:08:15behind
- 1:08:15them still live at a pencil and paper
- 1:08:18level
- 1:08:20unlike the stock market which is really
- 1:08:22easy to get data on
- 1:08:24but which has no principles at all we're
- 1:08:26very close to
- 1:08:27so nothing like a theory so in the
- 1:08:30domain of simple problems
- 1:08:33you can say that there is just
- 1:08:38observation
- 1:08:39which is just facts that we think we can
- 1:08:41get definite on
- 1:08:43then there's what's called phenomenology
- 1:08:46which is things like
- 1:08:48um carno's understanding of heat engines
- 1:08:50or
- 1:08:51the original um
- 1:08:56faraday trying to understand
- 1:08:58electromagnetism and recognizing that
- 1:09:00their connections
- 1:09:02between charges and electricity
- 1:09:05or between currents and magnetism things
- 1:09:07like that coulomb
- 1:09:08ohm those all live in the domain that
- 1:09:11physics calls phenomenology
- 1:09:13where you start to recognize that there
- 1:09:15are regular patterns you can quantify
- 1:09:17them
- 1:09:18but there's not a sense that you have
- 1:09:19kind of a unified theory of cause
- 1:09:21is that what we call laws in ohm's law
- 1:09:25[Music]
- 1:09:27the word law used to be used for those
- 1:09:30yes
- 1:09:30you're exactly right coulomb's law ohm's
- 1:09:33law
- 1:09:34faraday's law and so forth and so
- 1:09:39yeah so law is yet another word that
- 1:09:41comes in and makes things complicated
- 1:09:44in the phenomenologist's domain laws are
- 1:09:47these kind of reliable regularities
- 1:09:50that you're sure you can trust and you
- 1:09:51can quantify even if you're not sure you
- 1:09:53know cause behind them
- 1:09:56then you go one level beyond that
- 1:09:59and that's where the word theory starts
- 1:10:01to come in in physics
- 1:10:03so you have things like newton's theory
- 1:10:05of gravity where you can take
- 1:10:07all of kepler's and copernicus's
- 1:10:08phenomenology
- 1:10:10and you can say i can write down an f
- 1:10:12equals m a and a form
- 1:10:13f equals g and m over r squared
- 1:10:16and i can recover all that phenomenology
- 1:10:19by a process of construction from a
- 1:10:22simpler thing
- 1:10:23we call it a law again but newton's law
- 1:10:27is not a law in the same sense
- 1:10:29as kepler's laws were kepler's were
- 1:10:31phenomenological laws
- 1:10:33newtons are theoretical laws maxwell can
- 1:10:36take
- 1:10:36faraday and
- 1:10:40not i i guess coulomb not ohm because
- 1:10:45and he can put together a law that
- 1:10:47unifies electromagnetism
- 1:10:49and now you have maxwell's equations
- 1:10:50which are a law for electromagnetism
- 1:10:54and more than that they are a theory
- 1:10:58of electromagnetism where maxwell says i
- 1:11:01need to introduce
- 1:11:02this quantity called a field and
- 1:11:04stipulate that the field relates to
- 1:11:06charges in a certain way
- 1:11:08and that the field has dynamics that
- 1:11:10obey a set of equations
- 1:11:12so you're starting to introduce new
- 1:11:13objects into the discourse
- 1:11:15which are not just the objects of
- 1:11:17phenomenology
- 1:11:19and you're committing to mathematical
- 1:11:21relations quantifiable relations among
- 1:11:23the objects
- 1:11:24so that structure that you build up
- 1:11:27is what physics uses the word theory for
- 1:11:32and then einstein comes and says i need
- 1:11:34to do the same thing for gravitation
- 1:11:36i need to make geometry dynamic and i
- 1:11:38need to introduce fields that
- 1:11:40characterize
- 1:11:41the geometry and the satisfying equation
- 1:11:43of motion the same way maxwell's fields
- 1:11:45did
- 1:11:46for electromagnetism and einstein was
- 1:11:48entirely basing
- 1:11:50his view of general relativity
- 1:11:54on what maxwell had shown to be possible
- 1:11:56for
- 1:11:57electromagnetism so in physics the
- 1:12:00technical sense of theory
- 1:12:04is this sense of building a vocabulary
- 1:12:07where every term in the vocabulary
- 1:12:10refers to something you can completely
- 1:12:13operationalize
- 1:12:15in terms of how you do an experiment
- 1:12:16what you measure how you interpret the
- 1:12:18measurement
- 1:12:19and then how you use it to check a
- 1:12:21calculation as being either true or
- 1:12:23false
- 1:12:24it's that whole big structure and in a
- 1:12:28proper physics
- 1:12:29theory none of the terms do not have an
- 1:12:33operationalization in that sense
- 1:12:36so whereas theory had this flavor of
- 1:12:39tentativeness in its old common language
- 1:12:41use
- 1:12:42in physics by the time you get to a
- 1:12:44theory that is
- 1:12:45as reliable a piece of knowledge as
- 1:12:48anything that exists
- 1:12:49in the world it may not be the most
- 1:12:52familiar quantum states and quantum
- 1:12:54measurement and decoherence are not
- 1:12:56familiar for us but
- 1:13:00what the terms mean operationally a
- 1:13:03state vector
- 1:13:04an observable a decoherence event
- 1:13:08and how the mathematical relations that
- 1:13:11we're committing to as our understanding
- 1:13:13of nature
- 1:13:14those have no violations ever so there's
- 1:13:18nothing in human experience that is more
- 1:13:20reliable than these
- 1:13:23the best anything can ever achieve is to
- 1:13:25never have been wrong
- 1:13:26even once so it's kind of the limit of
- 1:13:29the best we know how to do so that makes
- 1:13:33conversation really challenging right
- 1:13:35because you have this one word
- 1:13:37that means things that are vastly
- 1:13:39separate in human experience depending
- 1:13:40on the context where it's being used
- 1:13:43and there are many other sciences
- 1:13:46where there is nothing that yet has the
- 1:13:50status
- 1:13:51of a theory in that sense
- 1:13:55and sometimes they only have the status
- 1:13:57of a theory in
- 1:13:58or a law in the phenomenological sense
- 1:14:02it is okay to say that
- 1:14:06evolution has the status of ethereum
- 1:14:08biology
- 1:14:12but
- 1:14:16to me it's you know if you were to walk
- 1:14:19up to me on the street
- 1:14:20and say i want to build a bridge can you
- 1:14:22tell me how
- 1:14:23and i said ah yes use mathematics
- 1:14:27you would not be impressed you'd say
- 1:14:29yeah of course if i had asked you about
- 1:14:31building a bridge or
- 1:14:32you know calculating a mortgage
- 1:14:34amortization
- 1:14:36or epidemiology the answer would always
- 1:14:38have been
- 1:14:39use mathematics i want to build a bridge
- 1:14:41can you tell me something
- 1:14:42particular so to say
- 1:14:45that the biosphere evolves under
- 1:14:47darwinian evolution
- 1:14:48is a little bit like answering the
- 1:14:50question about the bridge by saying use
- 1:14:52mathematics
- 1:14:53yes of course it applies to vastly many
- 1:14:55things
- 1:14:56but precisely because it's so general
- 1:15:00it's not doing the hard work of telling
- 1:15:02you how to answer
- 1:15:03most particular questions
- 1:15:07so yes it's a theory but it's a theory
- 1:15:09whose generality
- 1:15:13limits how much you're telling anyone
- 1:15:15when you say it
- 1:15:18it's a high level it's that the theories
- 1:15:21level is high as opposed to physics
- 1:15:23theories that are
- 1:15:24low level level of atoms
- 1:15:27or there is a gap so there is a
- 1:15:31so from evolution so in physics you know
- 1:15:34you got the
- 1:15:35quantum theories but from quantum you
- 1:15:37can't get to evolution evolution doesn't
- 1:15:39tell you anything about the quantum
- 1:15:41or or gravitational or the magnetic
- 1:15:44fields
- 1:15:45yeah i think i put it i think i would
- 1:15:48make the following analogy
- 1:15:50in mathematics we have something called
- 1:15:51the law of large numbers
- 1:15:54which says that for certain ways of
- 1:15:56taking samples with lots of entries and
- 1:15:58then aggregating them
- 1:16:00the aggregate value will tend to have
- 1:16:02certain stability properties that the
- 1:16:04individual things do not
- 1:16:06and the law of large numbers is
- 1:16:07incredibly important
- 1:16:09you can apply it to gambling but you can
- 1:16:11also apply it to thermodynamics and you
- 1:16:13can apply it to quantum field theory
- 1:16:16so the law of large numbers is not
- 1:16:19exactly a theory of any particular thing
- 1:16:22in physics but it's this incredibly
- 1:16:25general
- 1:16:26role that combinatorics plays in the
- 1:16:28theories of a lot of different things
- 1:16:30and without the law of large numbers you
- 1:16:32would not have quantum field theory
- 1:16:34because you have to have that to have
- 1:16:36renormalization
- 1:16:37and without renormalization you don't
- 1:16:39understand why any theory is stable
- 1:16:41of anything so i feel like
- 1:16:44darwin's natural selection is a kind of
- 1:16:47a minimally
- 1:16:48structured law it's a bit more
- 1:16:50structured than the law of large numbers
- 1:16:51it's a bit more particular
- 1:16:53because it assumes individuals and
- 1:16:54populations and generational structure
- 1:16:58but it's also extremely general in that
- 1:17:01it's not committing to what the
- 1:17:02individuals are or how the populations
- 1:17:04work or what the generation structure is
- 1:17:07so it's playing a role in biology a
- 1:17:09little bit like the mathematical role
- 1:17:11that the law of large numbers plays in
- 1:17:13many branches of physics and many other
- 1:17:15things too
- 1:17:20well now we know how
- 1:17:23theories work um so
- 1:17:27we have life now how much to can we make
- 1:17:30life in a lab no no
- 1:17:34we can't
- 1:17:37any form of life it depends on what you
- 1:17:40mean make
- 1:17:41right some viruses i've had you you
- 1:17:44could
- 1:17:45build in a lab simple viruses
- 1:17:48you can take a genome sequence and then
- 1:17:51you have enough molecular machinery that
- 1:17:53you can copy that genome sequence
- 1:17:55right you can you can take all of the
- 1:17:58genes out of
- 1:17:59you can sequence them in one organism
- 1:18:01you can build the genes
- 1:18:03in a cell-free system with molecules you
- 1:18:06can take that chromosome and you can put
- 1:18:08it in a cell
- 1:18:09and then the cell will live so craig
- 1:18:11venter's lab did this hamilton smith was
- 1:18:13the
- 1:18:14leader of a project like that
- 1:18:17um in what sense have you made something
- 1:18:22you have shown that the molecular
- 1:18:24components that you have are sufficient
- 1:18:26to do all the work
- 1:18:28so you've shown that there's not
- 1:18:29something missing in the cell that you
- 1:18:31didn't discover that was doing part of
- 1:18:33the work
- 1:18:35you haven't of course assembled a whole
- 1:18:37cell you took a complete cell
- 1:18:39then you took a genome and put in it
- 1:18:42eventually we'll be able to take
- 1:18:43membranes and proteins and components
- 1:18:45and genomes
- 1:18:46and as we get technically more
- 1:18:48sophisticated we'll be able to put all
- 1:18:50the components of the cell together
- 1:18:52and say there it's a cell but in what
- 1:18:55sense have you made anything you haven't
- 1:18:57had to understand anything
- 1:19:00causally to do that you've had to
- 1:19:02isolate a bunch of components and become
- 1:19:04able to build them
- 1:19:05and then be able to assemble them
- 1:19:09but you haven't answered any why
- 1:19:10questions you have answered only how
- 1:19:12questions and what questions
- 1:19:17so if i think about what it means to
- 1:19:20have understood the origin
- 1:19:22of life and shown that you understand it
- 1:19:23by making things
- 1:19:25i think you have to answer what how and
- 1:19:27why questions all
- 1:19:29three and the fact
- 1:19:32that so how to say
- 1:19:36when people criticize education
- 1:19:39and this is like a teeny teeny tiny
- 1:19:41version
- 1:19:42of the thing that science makes a huge
- 1:19:45version of
- 1:19:46when people criticize education they say
- 1:19:48don't just do rote memorization ask your
- 1:19:50students to think ask them to solve
- 1:19:52problems because they say
- 1:19:54even if you skip some of the
- 1:19:56memorization if your students learn to
- 1:19:58think they can go back and fill that in
- 1:19:59and it's a good use of time
- 1:20:01whereas you can have students who are
- 1:20:03great at memorizing things
- 1:20:04but then if you ask them to solve a new
- 1:20:06problem they have no skills at all
- 1:20:07they're still children
- 1:20:09and in general within education we think
- 1:20:11some version of that argument is roughly
- 1:20:13right
- 1:20:14you need to memorize a certain amount
- 1:20:15but you shouldn't only memorize you also
- 1:20:17need thinking skills
- 1:20:19well apply that to our biochemistry
- 1:20:21problem
- 1:20:23if all you're doing is making an exact
- 1:20:25copy of an exact genome of an exact cell
- 1:20:28and putting it in another cell it seems
- 1:20:31to me like you're doing an extreme
- 1:20:33version of the memorization
- 1:20:35you're not thinking
- 1:20:38whereas i think what we all would love
- 1:20:41and you know
- 1:20:42i don't mean this as a criticism of any
- 1:20:44of this work
- 1:20:45as molecular engineering it's a tour de
- 1:20:48force
- 1:20:48and the people doing it are giants
- 1:20:52but any any person with a reasonable
- 1:20:55level of humility
- 1:20:58will also say that if we talk about
- 1:21:00understanding the origin of life and
- 1:21:02making
- 1:21:03life we want the thing that's analogous
- 1:21:06to that thinking
- 1:21:06problem-solving part not just memorizing
- 1:21:09and copying
- 1:21:12and that we're not anywhere close to to
- 1:21:15doing
- 1:21:17and it's incredible how much people know
- 1:21:20it's so much more than nothing but if we
- 1:21:23did an
- 1:21:23honest account of how many other things
- 1:21:26are also true of life where we have
- 1:21:28no good ideas at all i bet
- 1:21:31you would find that by a factor of fifty
- 1:21:33to one or a hundred to one
- 1:21:35the things we don't have any good ideas
- 1:21:38about at all
- 1:21:38outnumber the things where we do have
- 1:21:40plausible ideas
- 1:21:42so there's just a huge amount of work
- 1:21:44and imagination that still needs to be
- 1:21:46provided
- 1:21:47to get there and do you think
- 1:21:50advancements
- 1:21:52in understanding the dna could
- 1:21:54potentially
- 1:21:56help us with the origin of life or
- 1:22:00or not for bits and pieces
- 1:22:04um you know an area where i'm a huge fan
- 1:22:07right now
- 1:22:08is work on the history of the ribosome
- 1:22:10and very early proteins
- 1:22:13so that's an area where we have history
- 1:22:16that goes back from
- 1:22:17before the origin of translation and
- 1:22:20that history is locked in and we can
- 1:22:21reconstruct it
- 1:22:23we have no understanding what the
- 1:22:25evolutionary dynamics look like
- 1:22:27in that early era because all the
- 1:22:29evolutionary dynamics we understand
- 1:22:32depends entirely on translation to even
- 1:22:34exist
- 1:22:36so what process was it that was laying
- 1:22:38down layers of structure
- 1:22:40in an era before translation exists
- 1:22:44because the structure it was laying down
- 1:22:46is the machinery that does
- 1:22:48translation so that's an area where i
- 1:22:51think we have a data gold mine
- 1:22:54and we have no compelling ideas at all
- 1:22:57and that's a great area to work because
- 1:23:00where you have no data
- 1:23:01then you're looking for the data and
- 1:23:03you're looking for ideas
- 1:23:05so you're lost in both directions but if
- 1:23:08you have an area where you have really
- 1:23:09rich data and no
- 1:23:10ideas then at least you know what the
- 1:23:13answer to the test question is you just
- 1:23:14don't know what the test question was
- 1:23:19and there are lots of areas like that
- 1:23:21that can be done mineralogy carbon in
- 1:23:22the deep earth
- 1:23:24and so people are doing good work in all
- 1:23:26these areas i still think computational
- 1:23:28chemistry
- 1:23:29is an incredibly fertile area because
- 1:23:32it's now strong enough to begin to do
- 1:23:34something but it's really powerful
- 1:23:36generation is still in front of us
- 1:23:41what is your what is one discovery
- 1:23:44you're most looking forward to
- 1:23:45elsewhere is it
- 1:23:50understanding why the genetic code has
- 1:23:52the form it does
- 1:23:54and how that connects to
- 1:23:57the earliest proteins and the earliest
- 1:24:00rnas
- 1:24:01i think that's a solvable problem and i
- 1:24:03might live long enough to see a good
- 1:24:04solution to it come
- 1:24:06into existence
- 1:24:10also um enough of the geochemistry may
- 1:24:13be solved
- 1:24:16that we start to attach numbers to
- 1:24:18whether or not
- 1:24:19the citric acid cycle could ever have
- 1:24:21been self-amplifying in geochemistry
- 1:24:24whether it's unique or not that problem
- 1:24:27was stalled for a long time but there
- 1:24:28are now
- 1:24:29several labs doing really terrific work
- 1:24:31on that
- 1:24:33not clear whether they see enough
- 1:24:35questions and are doing enough
- 1:24:37to really provide an answer but at least
- 1:24:39it's moving again
- 1:24:41and the stuff they're discovering is
- 1:24:44deeply satisfying and very beautiful so
- 1:24:47it's much better than nothing
- 1:24:49um that was where all my time was going
- 1:24:52for
- 1:24:5320 years and i i've gone into these
- 1:24:56other areas because i had no real good
- 1:24:57ideas to contribute
- 1:24:59in other areas so i'm i have to rely on
- 1:25:01them and stay connected to their work
- 1:25:03and hope that maybe it triggers an idea
- 1:25:05somewhere down the line
- 1:25:07final question have you ever had a
- 1:25:10eureka moment
- 1:25:14in little teeny tiny areas yeah right
- 1:25:18would you like to share with us any of
- 1:25:20any
- 1:25:22oh it's completely trivial stuff right
- 1:25:24right realizing that i know how to
- 1:25:25calculate the solution to the
- 1:25:27determinant of a certain matrix
- 1:25:29okay yeah silly little stuff you know
- 1:25:32the kind of stuff that students would
- 1:25:33normally be doing
- 1:25:35um but here's a thing that is fun
- 1:25:41if you have time and nothing to do which
- 1:25:44of course we all have tons of
- 1:25:46there's a wonderful book by alexander
- 1:25:48luria from the 1960s called the mind of
- 1:25:51a minimalist
- 1:25:54and it has to do with synesthesia autism
- 1:25:57and its role in memory
- 1:26:03and i don't know how many people are
- 1:26:06like me in this i am not
- 1:26:08a synesthesic person person in
- 1:26:12letters and colors and
- 1:26:16sounds for me are still separate
- 1:26:17modalities most of the time
- 1:26:20but when your mind is in its really
- 1:26:22relaxed form the form where ideas come
- 1:26:24in
- 1:26:26it often tends to be much more
- 1:26:27synesthetic or synesthesia whatever the
- 1:26:29correct
- 1:26:30usage is and so when i get one of these
- 1:26:33ideas if i happen to be out on a morning
- 1:26:35run
- 1:26:36and the moment when it occurs to me i
- 1:26:38know how to solve the determinant
- 1:26:40is also a moment when i happen to be
- 1:26:42jumping over a small ditch and being
- 1:26:43careful not to twist my ankle
- 1:26:46that whole moment will remain available
- 1:26:48attached to that determinant forever
- 1:26:51so the whole mind is there at the same
- 1:26:53time and
- 1:26:55the smell of the grass and the shape of
- 1:26:57the ditch and the feeling of the motion
- 1:26:59and the solution of the determinant are
- 1:27:02part of one state of mind and ceilard
- 1:27:04talks about this when he talks about
- 1:27:06seeing
- 1:27:07the chain reaction and stepping off a
- 1:27:09bus
- 1:27:10so i know other people have this
- 1:27:12experience and i suspect it's probably
- 1:27:14pretty common
- 1:27:17but i find that interesting i in terms
- 1:27:19of using the mind and how best to relax
- 1:27:22the mind
- 1:27:23and make it able to do its best work in
- 1:27:26seeing new things
- 1:27:28i like the thought of being
- 1:27:29methodological and looking for that
- 1:27:31relaxed
- 1:27:32state in a better way sort of knowing
- 1:27:34what it how it works and what it feels
- 1:27:36like and we have access to that
- 1:27:37both from our own experiences and from
- 1:27:39things other people write
- 1:27:41do you meditate by any chance probably
- 1:27:45not
- 1:27:46right um but
- 1:27:50that has become such a trendy thing
- 1:27:53that i don't want to claim any knowledge
- 1:27:57or participation in it
- 1:27:59because i know people who are serious
- 1:28:01about it and know a lot and have
- 1:28:02committed themselves over the course of
- 1:28:04a lifetime
- 1:28:05and i don't want to be disrespectful to
- 1:28:07those people's knowledge by imagining
- 1:28:08that i know anything about it when i
- 1:28:10haven't put in the work i see
- 1:28:15and it's a it's a natural question to
- 1:28:17ask and i wonder the same kind of stuff
- 1:28:20yeah i i'm also curious to get your
- 1:28:22thoughts on free will
- 1:28:26since it's a term that needs to mean
- 1:28:29something
- 1:28:29first hmm well
- 1:28:32i well my
- 1:28:36well free will yeah that's a good
- 1:28:39question defining what
- 1:28:41what we mean by free will yeah
- 1:28:44yeah that i think
- 1:28:47most people's perception of free will is
- 1:28:50wrong
- 1:28:50because you're still you're just
- 1:28:52following laws of nature
- 1:28:54but but you have degrees of freedom
- 1:28:57within that
- 1:29:00so yeah but what's the question right
- 1:29:03yeah yeah again yeah
- 1:29:04you're looking for exactly defined term
- 1:29:06you know i don't have it
- 1:29:09well i think what i'm looking for is
- 1:29:11good categories
- 1:29:13so if you live in the
- 1:29:17in the ancient world where you like to
- 1:29:20ask the question are viruses alive or
- 1:29:22not
- 1:29:24the fact that you can endlessly go in
- 1:29:25circles chasing your tail on that
- 1:29:28is a signal that you probably are not
- 1:29:29using good categories
- 1:29:32but that doesn't mean you know what
- 1:29:33categories to replace them with that are
- 1:29:35better
- 1:29:37and of course in spite of the fact that
- 1:29:38i have made this heroic claim
- 1:29:41that it's a category error to ask
- 1:29:42whether things are alive and you should
- 1:29:44look for life as a phase transition
- 1:29:46you know how many people actually are
- 1:29:47using that terminology
- 1:29:51at most one which is me um
- 1:29:54maybe occasionally someone else in a
- 1:29:56slip but most people are perfectly happy
- 1:29:58to continue asking whether viruses are
- 1:30:00alive and they don't care that i think
- 1:30:01they should be asked in a different way
- 1:30:04so i think that the tangles they get
- 1:30:07themselves in
- 1:30:08show the category error i think there
- 1:30:10are better categories available
- 1:30:12and the fact that i think that has had
- 1:30:15no consequence in the world at all
- 1:30:18similarly for free will i think the fact
- 1:30:20that it's such a tangled mess
- 1:30:24is an indication that the language
- 1:30:26doesn't it's not capable of carrying
- 1:30:27much weight it's an impressionistic
- 1:30:29poetic language that doesn't have
- 1:30:30categories at all
- 1:30:32and so we are looking for better
- 1:30:34categories
- 1:30:35where will they come from
- 1:30:39i have opinions on that but i don't
- 1:30:42think there's
- 1:30:43any nice clean approach to it that is
- 1:30:46that carries as much weight as i think
- 1:30:49the face transition language will carry
- 1:30:50for the nature of the living state
- 1:30:53it's a harder problem and on that note
- 1:30:57we'll we'll end the interview thank you
- 1:30:59very
- 1:31:01what much pleasure what fun talking to
- 1:31:03you great
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